Sciurus carolinensis (gray squirrel): 124978980
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Entry
124978980 CDS
T08117
Name
(RefSeq) ATP-dependent DNA helicase Q5-like isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124978980
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124978980
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124978980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ5
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TFIIS_M
KIX_2
Motif
Other DBs
NCBI-GeneID:
124978980
NCBI-ProteinID:
XP_047398952
EnsemblRapid:
ENSSCRG00010001857
LinkDB
All DBs
Position
3:5515851..5550295
Genome browser
AA seq
990 aa
AA seq
DB search
MNTHPSSTSFDPERRVRSTLKKVFGFDSFKTTLQESATMAVVKGDKDIFVCMPTGAGKSL
CYQLPALLAKGITIVISPLIALIQDQVDHLLALKVRVSSLNSKLSAQERKELLSDLEREK
PWTKLLYITPEMAAASSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALR
SRLAHAPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDVQFKELISDPFG
NLRDFCLKALGQKANKGLLSGCGIVYCRTREACEQLAIELSSRGVNAKAYHAGLKASDRT
QVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWC
RLYYSRNDRDQVSFLIKKEIAKLQEKRGNKASDKATLLAFEALVTFCEELGCRHAAIAKY
FGDALPACTKGCDYCHNPAAVRRQLDALEHSSSWSKTCIGPSQGNGFDPELYEGGRRGYG
GFSRYDEGSGGSGDEGRDEAHKREWSLFYQKQMSLRKGKDPKIEEFVPPDEDCPLKEASS
RKIPRLTVKAREHCLGLLEEALSSNRQATGSSDGTDLQAQAVQLEHETFQNAKMANLYKA
SVLRKVAEIHRASKDGQLYDMGGGAKSCSAQAEPPEPNEYDIPPASHVYSLKAKRVGAGF
PKGSCPFQTAGELLGKSQTQEHVPQSVQKDDQEPHSQPYGLQDKDVSESLSGPKGEVPGG
SAQCAGPSPEKVKGSSRSSSVAKARASKKQQLLAAAAHKDSQNIARFFRQRAESPPPLAE
APRADGARSCGIMQGPLMTPEKCTEEEDGVQGHLTAPPETEACPSEGPSACPLGDQGFLE
AQLTPTKKTQMGKRPRSKQENPESQAQKRPRPPAKPSILAEVRDSALASEQGTLNAMAQD
PCQLTSPGISLKEAADVVVRYLTPFYKDGKFASKELFKGFARHLSHLLIQRTFPGRSAKE
EAQSLIKHFFHGHTRCESEADWHSLYGPQT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccacccttcttccacttcctttgaccctgaacggcgagtccggagcacgttg
aagaaagtctttgggtttgactcttttaagacaactttacaggagagtgcgaccatggct
gtagtgaaaggtgacaaggatatctttgtgtgcatgcccacaggtgcaggaaaatcactt
tgctatcaactccctgcactgttggctaaaggcatcaccatcgttatctctcctcttatt
gctttgattcaggaccaggtggaccacttgctggccctgaaggtacgagtcagttccctg
aactcaaagctctcagcacaggagaggaaggagctgctctctgacctggagcgagaaaaa
ccctggaccaagcttctctacattactccagagatggcagccgcatcctccttccagccc
accctgaattccctagtgtcccgacaccttctctcttacttggtggtggatgaagctcat
tgtgtttcccaatggggacatgactttcgtcctgattacctgcgtctgggtgccctgcgc
tcccgcctggcacatgccccatgtgtggctctgactgccacagccactcctcaagtccaa
gaggacgtgtttgctgccctgcatctgaagcaaccagttgccactttcaagactccctgc
ttccgggccaacctcttttatgatgtacagttcaaggagctgatttcggatccatttgga
aacctgagggatttctgccttaaggctcttggacagaaggctaataaagggttgttgtct
ggctgtggcattgtctactgcaggactagagaggcttgtgaacagctggccatagagctc
agcagcaggggtgtgaacgctaaggcttaccatgcagggttgaaggcttctgatagaaca
caggtacaaaatgagtggatggaggagaaggtccctgtaattgttgcaaccatcagtttt
ggaatgggagtggacaaagccaatgtcaggtttgtcgcccactggaatattgccaagtca
atggctgggtactaccaggagtctggccgggctggcagggatgggaagccttcttggtgc
cgtctctattactctaggaatgaccgggaccaagttagctttctgatcaagaaggaaatt
gcaaaactgcaggaaaagagagggaacaaagcctctgataaagccacccttttggctttt
gaggccctggtgaccttctgtgaagaattggggtgccgccatgctgccattgccaagtac
tttggggatgccctgcctgcctgcaccaaaggctgtgactattgccacaaccctgcagct
gtgcggagacagctggacgccttggagcacagcagcagctggagcaagacctgcatcggg
ccctcccaggggaacggctttgaccctgagctgtatgaaggaggccgcaggggctacggg
ggcttcagcaggtatgatgaaggttctggaggcagcggtgatgagggcagagatgaggcc
cacaagcgggaatggagtctcttctatcagaagcagatgagtctgcgcaagggcaaagac
cccaagatagaagaattcgtacccccagatgaagattgtcccctgaaagaggcttctagc
agaaagattcccaggctcactgtgaaggcccgtgagcactgcctgggtctcctggaggag
gctctgagcagcaaccgccaagccacaggttcaagtgatggaacagacctccaggcccag
gccgtgcagctagaacatgagacattccagaatgccaagatggccaacctgtacaaggcc
agcgtgctgaggaaggttgctgagatccacagagcctccaaggatgggcagctctatgac
atgggaggtggtgccaagagctgcagtgcccaggctgagcccccagagcccaatgaatat
gacatcccaccagcctcccatgtgtactcgctcaaagccaagagggtgggagctggcttc
cccaaaggctcctgcccattccagacagctggggagctgctggggaagtctcagactcag
gagcatgtcccccagtctgtgcagaaagatgatcaagagccccacagccaaccttatggc
cttcaggataaggacgtgagtgagtccctctctgggcccaaaggagaggtccctggaggt
agtgctcaatgtgcgggaccctcccctgagaaggtgaaaggctcttccaggagcagttct
gtcgccaaggcccgggccagcaagaagcagcagctcctggccgcagcagcccacaaggat
tcccagaatattgcccgcttcttccgtcaaagggcggaaagcccacctccacttgccgaa
gccccaagggcagatggtgcccgctcctgtgggataatgcagggacccctgatgacccca
gagaaatgcacagaggaagaagatggagtccagggacatttgacggcccctcctgagacg
gaagcatgtcccagtgaggggcccagcgcctgccctctcggagaccaggggttcctcgaa
gcccagctcacccccacaaagaagacacagatgggcaagcggcccagatccaagcaggag
aatccagagagtcaggctcagaagaggcctcgccccccagccaagccctccattttagca
gaggtcagggacagtgccttggccagtgagcagggcaccttgaatgccatggcccaagac
ccctgccaactcacatctcctggcatctccttgaaggaggctgcagatgttgtggtcagg
tacctgacccccttctacaaggatggcaagtttgcatccaaggagttgtttaaaggcttt
gcccgccacctctcacacttgctgatccagaggacctttcctggaaggagcgcgaaggaa
gaggcccagagcctcatcaagcactttttccatgggcacacccgttgcgagagtgaagct
gactggcacagcctgtatggcccacagacatga
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