Sciurus carolinensis (gray squirrel): 124981124
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Entry
124981124 CDS
T08117
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124981124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124981124
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124981124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
PH
SH3_2
SH3_16
Motif
Other DBs
NCBI-GeneID:
124981124
NCBI-ProteinID:
XP_047403257
EnsemblRapid:
ENSSCRG00010001929
LinkDB
All DBs
Position
3:complement(176438727..176521180)
Genome browser
AA seq
707 aa
AA seq
DB search
METTELEDLEKSWKNSGIDSWKVDKESARVRPELLPKKEERPHAEPESQDKEPRRHMPLQ
RNSIFNRTVRHRSRAKVRSAPEQNSSQLADSQENGKSVNEPLTLNLPQSRKPLWRIPRQM
GPGAQNQSESSSTPGNGTTPEECPALADSPTTLTQALQMIHPIPADSWRNLIEQIGLLYQ
EYRDKSTLQEIEARRQQDAELQGSADGSPASEDTPEEEEEEEEPASPPERRALPQICLLS
NPHSRFNLWQDLPEIQSSGVLEILQPEEVKLQEAMFELVTSEASYYKSLNLLVSHFMENE
RMKKILHPSEAHILFSNVMDVLAVSERFLLELEHRMEENIVISDVCDIVYHYAANHFSVY
ITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPFSSFLILPFQRITRLKLLV
QNILKRVEESSEREGTALDAHRELEMVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPI
ISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSA
SRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKASSQSEMKRWMTSLAPNRRTK
FVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILERTEDGWIFGERLHDQERGWF
PSSMTEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacagaactggaagatttggaaaagtcctggaagaactcagggattgattca
tggaaggttgacaaggaatcagccagggtgagacctgagctgcttccaaaaaaagaggag
aggccccacgctgagccagagagccaggacaaagaaccccgccgccacatgcccctgcag
agaaactccatcttcaaccgcaccgtgagacacagaagcagagccaaggtcagaagtgcc
cctgagcagaactccagccagctggcagattcacaggaaaatgggaagtctgtaaatgag
cccctgaccttgaatcttccgcagagcagaaagcctctctggaggataccaagacagatg
gggccgggagcccagaaccaaagcgagtcatcctccaccccgggaaatgggaccacgccc
gaggagtgcccggccctggcggacagccccaccaccctcacccaggccctgcagatgatc
catcccattcctgccgactcctggagaaacctcattgaacaaatagggctcctatatcag
gaataccgagataaatcgaccctccaagaaatcgaggccaggaggcaacaggatgcagag
ctacagggcagtgcagacgggtccccggccagcgaggacaccccggaggaggaggaggag
gaggaggaaccggcaagcccacccgagaggagggctctgccccagatctgcctgctcagc
aacccccactcgaggttcaacctctggcaggaccttccagagatccagagcagcggggtg
ctggagatccttcagcccgaggaggtcaaactacaggaggccatgttcgagctggtcacc
tccgaggcctcctactacaagagcctgaacctgctggtgtcccacttcatggagaacgag
cggatgaagaagatcctgcacccgtcggaggctcacatcctcttctccaacgtcatggac
gtcctggccgtgagcgagcggtttctgctggagctggagcaccggatggaggagaacatc
gtcatctccgacgtgtgcgacatcgtgtaccactacgcggccaaccacttctccgtctac
atcacctacgtgagcaaccagacctaccaggagaggacctacaagcagctgctccaggag
aaggcggctttccgggagctgatcgcgcagctggagctcgaccccaagtgcagaggcctg
cccttctcctccttcctcatcctgcccttccagaggatcacgcgcctcaagctgctggtg
cagaacattctgaagagggtggaagaaagctccgagcgcgaaggtactgccctggatgcc
cacagggaactggagatggtggtgaaggcgtgcaatgagggcgtcaggaaaatgagccgc
acggagcagatgatcagcatccagaagaagatggagttcaagatcaagtcggtgcccatc
atctcgcactcccgctggctgctgaagcagggcgagctgcagcagatgtcgggccccaag
acctcccgcaccctgcggaccaagaagctcttccgagagatttacctcttcctcttcaac
gacctgctggtgatctgccgccagatccctggagacaagtaccaggtgttcgactccgcc
tcgcgcggcctgctgcgagtggaggagctggaggaccagggccagacgctggccaacgtg
ttcatcctgcggctgctggagaacgcagatgaccgcgaggccacctacatgctgaaggca
tcctctcagagtgagatgaagcggtggatgacctctctggcccccaacaggaggaccaaa
tttgtttccttcacatcccggctgctggactgcccccaggtccagtgcgtgcacccgtat
gtggcccagcagcctgacgagctgacgctggagctggctgacatcctgaacatcctggag
aggacagaagatgggtggatctttggggagcgcctgcatgaccaggagagaggctggttc
cccagctccatgaccgaggagatcctgaaccccaagatccgctctcagaacctcaaggaa
tgtttccgtgtccataagatggatgaccctcagcgcagccagaacaaggaccgcaggaag
ctgggcagccggaatcggcagtga
DBGET
integrated database retrieval system
