Sciurus carolinensis (gray squirrel): 124982436
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Entry
124982436 CDS
T08117
Name
(RefSeq) gamma-tubulin complex component 6-like isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124982436
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124982436
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
124982436
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
124982436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
124982436
NCBI-ProteinID:
XP_047405021
EnsemblRapid:
ENSSCRG00010002274
LinkDB
All DBs
Position
4:complement(176607119..176625874)
Genome browser
AA seq
1765 aa
AA seq
DB search
MASITQLFDDLCEALLPAAPARPGQRSVNRRRAKQTLKRVAYNALFTHLFQEETHQLQPD
LSKLPVRNKVLMLSFDLRVGGLGPEADRLEELVEELEAAPCCPLVEVGSVLDLLVQLAGS
GPPRILRRKRDYFFNNKHAGRKVPYSGYDCYNLSVFEMDVQSLISSEEYSCHNMIQETLQ
VMEAAPGTGLPTVGLLFGDPCGDRFERDTRVSLFGALVHSRTYDMDVRLDLPPVPDSADL
SGLAIKVPQSVDQWEDEGFQSASNLTPDSQSEPSMTPDVDLWEAALTYEASKRRCWEQVG
CPPGHREESYLTEAGRDAFDRFCRLRQGELQALSGGLLQAPRPMLVKEQELVKDSLNVLL
GVVSATFSLCQLSQAFVVERGVHVSGASPESISSILSEVAEYGTCYTRLSHFSLQPVLGS
SCSRGLVFQAFTSGLRRYLQYYRACVLATPPTLSLLTIGFLFKKLGRQLRYLAELCGVGT
VLPGSSGGEPRAVFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVY
SGVFRDVCGEFMIQVNHEYLGFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGKT
INLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSISKEEK
ELRMEIAKQELIVHAREAASRVLSELSDRQMSEQMAVDARKREQFQRLKEQFVKDQERRL
AARQEDLADDFSYAREVRDREKRLTALEEELERKARQALVDHYSKLSAEAARREQRALWR
IQRHRLESARLRFFLEDQKRVQEMLKNMAEACQPQELLRDPSACSQVTSPGPTRPDRGRT
CDSGPTELRLAAWDCPGRPCVPTLQAVESPAVESGDSGSRLAEGAEPFSAGLSITDFLPT
DPRAEQPVQTSRALLLEEALQTISSDLPPAAPGEVHVAAGTQPAQLRAYDFSTTLRPAAS
PSPPSGPLQAVQGSSGAHAKLAAHGPDTQVALPPQLRPADEGSSQPTGQLLGPVSDASIR
VGENVADVTPSRPRWNIHGHVSDANIRVGENVADVAPSRPRWNIHGHVSDANIRVGENVA
DVAPSRPRWNIHGHVSDANIRVGENVADVAPSRPRWNIHGHVSDANIRVGENVADVAPSR
PRWNTHGHVSEANIRVGDNVADVAPSRPRWNIHGHVSDANIRVGENVADVAPSRPRWNTH
GHVSDANIRVGENVADVAPSRPRWDTHGHTSQSPMMLGVLLSEMEPNLPRPHQSCPGHVS
QSGASLEVQGPAWECGPQLPADTEPSICSPSVGSLQTLPSPVSSTFGDSVSREPGPGKSG
DDEDLSPSWPAASQEGTAAPSAPDSREAAAEEEAQRRGGEQAYVAGLARMYCLEPYPDRY
ESMSEPPAAHLVHHVLPRAFAFPVDPRVQPAVDETAVQLSELLTLPVLMQRSLTAPLAAH
VSLVNKAAVDYFFAELHLEAHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNP
LVLNCILSKALQYSLHGDTPHATNLSFALKYLPEVFAPNAPDVLSCLELRYKQVDWPLNI
VITESCLSKYSGIFSFLLQLKLMMWTLKDVCFHLKRTALVSHTAGSVQFRQLQLFKHEMQ
HFVKVTQGYIANQILHVSWCEFRARLATVGDLEEIQRAHAEYLHKAVFRGLLTEKAAPVM
NIIHSIFSLVLKFRSQLISQAWGPASGPRGAEHPNFALMQQSYNTFKYYSHFLFKVVTKL
VNRGYQPHLEDFLLRINFNNYYQDT
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatcacgcagctgttcgatgacctgtgcgaggccctcctgccagctgccccg
gctcgcccgggccagcgcagcgtgaaccggaggagggcgaagcagacccttaagagagta
gcctacaatgctctgttcacacacctctttcaagaagagactcaccagctgcagcccgac
ctctcgaagctccccgtgagaaacaaggtcctcatgttgtccttcgacttgagagtgggt
ggcctgggccccgaggcggaccgattggaggagctggtggaggagctggaggcagcccct
tgctgtccactcgtggaggtggggtctgtgttggacctcttggtgcagctggcagggagt
ggcccgcctcgaatactgcggaggaaacgggactacttctttaacaacaagcatgccggc
agaaaagtcccgtacagcggctatgattgctataacctgagtgtgtttgagatggacgtt
cagtccctgatctccagcgaggagtattcctgtcacaacatgatccaggaaacactgcaa
gtgatggaggctgctccaggcactggcctgcccaccgtaggtctcttattcggtgaccct
tgtggtgacaggtttgagagagatacccgggtctcgctcttcggtgcccttgtgcacagc
cgcacttatgacatggatgtccgactagacctgccccctgttccagatagtgcagatctc
tctggactagccattaaggtccctcaaagtgtggatcagtgggaagatgaaggattccag
tcagcatccaatttgactcctgattctcagtctgaaccgagcatgaccccagatgtggac
ctgtgggaagctgcactcacctatgaggccagcaagcggaggtgctgggagcaagttgga
tgcccccctggccacagagaggagtcctaccttaccgaggcgggaagggacgcctttgac
aggttctgcaggctccgccaaggtgagctgcaggccctcagtgggggcctcctgcaggct
ccaaggcccatgctggtgaaggagcaagagctggtgaaggactcgctgaacgtcctgctt
ggggtggtgtctgccacgttctccctctgccagctctctcaggccttcgtggtggagcgg
ggtgtccatgtgtcaggggcttctcctgagagcatcagtagcatcctgtcggaggtggcc
gagtatgggacctgctacacacgcctgagccacttctccctgcaacccgtgctgggctcc
tcctgcagcagaggccttgtgtttcaggccttcaccagcggcttgaggcggtacctgcag
tactaccgggcctgtgtcctcgccactccacccaccctcagcctcctcaccattggcttt
ctattcaagaagctgggccggcagctcaggtacctggctgagctctgtggtgtcggcact
gtgctcccggggtccagcggaggagagcccagggctgtgttccccaccggggtgaagctg
ctgtcctacctctaccaggaagctctggacaactgcagcaacgagcactaccctgtgctg
ctgtccctgctgaagaccagctgcgagccctatacacggttcattcatgactgggtgtac
agtggggtcttcagagacgtgtgtggggagttcatgatccaggtgaaccacgagtacctc
ggcttcagagacaaattttactggactcatggctatgtgctcatctccaaagaagtggag
gactgcgtccctgtgttcttgaagcacattgctcatgacgtgtacgtctgtgggaagacc
atcaacctgctaaagctctgctgtccccggcactacctctgctggtctgatgtccctgtt
cctcgcatctcggtgattttctccctggaggagttgaaggagattgagaaggactgtgct
gtctacgttgggcggatggagagggttgcccgccacagctccatcagcaaggaggagaag
gaattacgtatggaaatcgcaaaacaagaactaatcgtccatgcccgggaagcagcgtcc
agggtcctcagtgagctgagtgaccggcagatgtcggagcagatggccgtggacgcccgg
aagcgagagcagtttcagcgtctaaaggagcagtttgtgaaggaccaggagcgtcgcctg
gcggcccggcaggaggacctggcagacgacttcagctatgcccgtgaagtccgggaccgg
gagaagcgactgacggccctggaggaagagctggagaggaaggccaggcaggcactggtc
gaccactacagcaagttgtctgcagaggcagctcgtcgggagcagagggcgctgtggaga
atccagaggcaccgactggaaagcgcacggcttcgttttttcctggaagatcaaaagcgt
gtccaggagatgctgaaaaacatggctgaggcttgccagccccaggagctgctgcgtgac
ccgagtgcctgctcccaggtcacatctccgggccccacgcgcccagacagaggtcgcacc
tgtgattcaggacccacagagctgcgcttggctgcctgggattgcccaggcaggccgtgt
gtgcccacactgcaggccgtcgagtctccagcggtggagtcgggtgactcggggagcagg
ctggcggagggggccgagccattctccgctggcctcagcatcacagacttcctgcccaca
gatcccagggctgagcagcccgtgcagaccagcagggcccttctcctggaggaggcgctg
cagaccatcagctcagacctgccccccgctgcccctggggaggtccacgtggcagctggc
acgcagcctgcccagctgcgggcttacgacttcagcaccaccctgaggccggccgcaagc
ccctcgcctccatcagggcccctccaggctgtccagggcagctcgggcgcccacgcgaag
ctcgctgctcatggccccgacacacaggtggctttgcctccccaactcaggcctgctgat
gagggaagcagccagcccacagggcagctccttgggcccgtgtcagacgccagcatcagg
gtgggtgagaacgtggcagacgtgactccctcccggccacggtggaacatccacgggcac
gtgtcagacgccaacatcagggtgggtgagaacgtggcagacgtggctccctcccggcca
cggtggaacatccacgggcacgtgtcagacgccaacatcagggtgggtgagaacgtggca
gatgtggctccctcccggccacggtggaacatccacgggcacgtgtcagacgccaacatc
agggtgggtgagaacgtggcagacgtggctccctcccggccacggtggaacatccacggg
cacgtgtcagacgccaacatcagggtcggggagaacgtggcagacgtggctccctcccgg
ccacggtggaacacccacgggcacgtgtcagaagccaacatcagggtcggggataacgtg
gcagacgtggctccctcccggccacggtggaacatccacgggcacgtgtcagacgccaac
atcagggtgggtgagaacgtggcagacgtggctccctcccggccacggtggaacacccac
gggcacgtgtcagacgccaacatcagggtgggtgagaacgtggcagacgtggctccctcc
cggccacggtgggacacccacgggcacacctcccagtcacccatgatgctgggggtgctc
ttgtcagagatggagcccaacctgcccaggccccaccagagctgccctggccacgtgtcc
cagtcaggcgccagcctggaagtgcagggccctgcctgggaatgtgggccacagctacct
gcagacacagagccttccatctgctctcccagtgtgggcagtctgcagaccttgccctct
cctgtgtccagcacttttggagacagtgtctccagggagccaggcccagggaagagtggt
gacgatgaggacctctctccaagctggcctgcagcctctcaggaaggcacagctgcccca
agcgccccagactccagggaggcggcggctgaggaggaggcacagcgccggggcggagag
caggcctacgtggcaggcctggccaggatgtactgcctagagccctatcccgaccgctac
gagtccatgtcagagccgcctgctgcccacctggtgcaccacgtgcttccccgggccttt
gccttcccggtggatccccgggtgcagccggctgtggacgagactgcagtgcagctcagc
gagctgctgacgctgcccgtgctcatgcagcgctccctgaccgccccgctggctgcccac
gtctccctggtgaacaaagctgccgtggactacttcttcgccgagctgcacctggaggca
cactttgaggccctccggcacttcctgctgatggaggatggggagtttgcccagtccctg
agtgacctgctctttgagaagcttggggctgggcagacacctggggagctgctcaacccg
ctggtcctcaactgcatcctgagcaaggccctgcagtacagcctccacggggacacgccc
catgccaccaacctctcctttgccctgaagtacctgcctgaggtgtttgctcccaatgcc
ccggatgtgctgagctgcttggagctcaggtacaagcaggtcgactggcccctcaacatc
gtgatcactgaaagctgcctgagcaagtacagcggcatcttctccttcctgctgcagctg
aagctcatgatgtggacactcaaggacgtctgtttccacctcaagcgcacagccctggta
agccacacggctggctcggtgcagttccgccagctgcagctgttcaagcacgagatgcag
cacttcgtgaaggtcacccagggctacattgccaaccagatcctgcacgtcagctggtgt
gagttcagggcccggctggctacagtgggtgaccttgaggagatccagcgcgcccacgca
gagtacctgcacaaggctgtcttcaggggcctgctcacagagaaggcggcgcctgtcatg
aacatcatccacagcatcttcagcctggtgctcaagttccgcagccagctcatctcccag
gcctggggcccagccagtggcccccggggtgctgagcaccccaactttgctctcatgcag
cagtcctacaacaccttcaagtactactctcacttcctcttcaaagtggtgaccaagctg
gtgaaccgcggctatcagccccacctggaggacttcctgctgcgcatcaacttcaacaat
tactaccaggacacttga
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integrated database retrieval system
