Sciurus carolinensis (gray squirrel): 124982514
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Entry
124982514 CDS
T08117
Name
(RefSeq) plexin-B2 isoform X1
KO
K06821
plexin B
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124982514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
TIG_plexin
PSI
RasGAP
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
124982514
NCBI-ProteinID:
XP_047405230
EnsemblRapid:
ENSSCRG00010002647
LinkDB
All DBs
Position
4:complement(176655611..176683596)
Genome browser
AA seq
1887 aa
AA seq
DB search
MAAARSEAQRRARPGRHRASPADVQGLHACLEWRLIWTAGASGAWAMALPLWALTLLGLV
GLGVGLRPRKLNVFCSEMELNHLVVDGSSGVVYVGAVNMLFQLSDDLRLQQQAATGPALD
NKKCTPPIEASQCHEAVPTDNANQLLLLDLPGKRLVECGSLFKGICALRALSNISVRLFY
EDGSGEKSFVASNDESVATVGLVSSTGPGGERVLFVGKGNGPYDNGIIVSTRLLDRTEGR
EAFEAYSDHTTFKAGYLSTNTQQFVAAFEDGPYVFFVFNQQDKHPARNRTLLARMCKEDS
SYYSYVEMDLQCREPSDPQGPAFGACLAASVATPGASRVLYAVFSRDGRSSGGPGAGLCL
FPLEEVHAKMEANRNACYTGSREASRDTFYKPFHGEIQCGGHVLGASENFPCGSEHLPYP
LGSRDGLTAMAVLQRGGLNLTAVTVTAENGHTVAFLGTSDGRILKVYLAPDRTSEEYSSI
LVEINKRIKRDLVLSGDLSSLYAMTQDKVFRLPVQECLSYLTCAQCRDSQDPYCGWCVVE
GRCTRRAECPRAKETGHWLWSRDKSCVTIIDAQPQNMSRRAQGEVQLTVSPLPALTEEDE
LLCLFGESPPHPARVEGDAVVCNSPSSIPSTPPGQDHVAVSIQLLFRRDDVFLTSHQYPF
YDCREAMSLVENLPCISCASNRWTCQWDLRYHECREASPNPEDGIIRAHMEDNCPQFLNP
SPLVIPMSHETDVIFQGKNLDTVKGSSLHVGSDLLKFEESVTMQERGTFFFRTPKLSHDA
NETLPVHLYVKSYGKNIDSKLQVTLYNCSFGRSDCSLCLAADPAYRCVWCREQSRCVYGA
LCSNATSECPPPVITRIQPETGPLGGGIRVTILGSNLGIKADDVKRITVAGKNCAFEPER
YSVSTRIVCVTEAAETPSTGGVEVDVSGKLGHSPPSVQFTYQQPQPLSVEPRQGPQAGGT
TLTINGTHLDTGSKEDVRVTLSDVPCEVTKFGVQLQCITGPQATLGEVALEISYGGSLVP
SPGVSFTFRENPVLRAFEPLRSFVSGGRSINVTGQGFSLIQKFAMVVIAEPLQSWRRRRE
AGPLQPTVVTGTKYVFYNDTRVVFLSPAVPEEPEAYNLTALIQMDGHRALLRTEAGAFEY
VADPTFENFTGGVKKQVNKLIHARGTNLNKAMTLQEAEAFVGAERCIMKTLTETDLYCEP
PEVQPPPKRRQKRDTTHNLPEFIVKFGSREWVLGRVEYDTRVSDVPLSLILPLVIVPMVV
VIAVSVYCYWRKSQQAEREYEKIKSQLEGLEESVRDRCKKEFTDLMIEMEDQTNDVHEAG
IPTLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPESRRPVVEQALYQFSNLLNSKSFLIN
FIHTLEGQREFSARAKVYFASLLTVALHGKLEYYTDIMRTLFLELMEQYVVAKNPKLMLR
RSETVVERMLSNWMSICLYQYLKDSAGEPLYKLFKAIKHQVEKGPVDAVQKKAKYTLNDT
GLLGDDVEYAPLTVSVIVQDEGVDAVPVKVLNCDTISQVKEKIIDQVYRTQPCSCWPKPD
SVVLEWRPGSTAQILSDLDLTSQREGRWKRINTLMHYNVRDGATLILSKVGVSQQPEDSQ
QDLPGERHALLEEENRVWHLVRPADEVDEGKSKRGSMKEKERTKAITEIYLTRLLSVKGT
LQQFVDNFFQSVLAPGHAVPPAVKYFFDFLDEQAEKHDIKDEDTIHIWKTNSLPLRFWVN
ILKNPHFIFDVHVHEVVDASLSVIAQTFMDACTRTEHKLSRDSPSNKLLYAKEISTYKKM
VEDYYKGIRQMVQVSDQDMNTHLAEISRAHTDSLNTLVALHQLYQYTQKYYDEIINALEE
DPAAQKMQLAFRLQQIAAALENKVTDL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcgcggtccgaagcgcagcgcagagcgcggcccgggcgccatcgagcctcg
ccggcggacgtgcagggtctccatgcctgcctggagtggagactgatctggaccgctgga
gcctcgggtgcctgggcgatggcactgccactgtgggccctgaccctcctggggctggtg
ggcctgggtgtgggcctgcggccccgaaagctgaacgtcttctgcagtgagatggagctg
aaccacctggttgtggacgggtcctcaggtgtggtgtacgtgggggcagtgaacatgctc
ttccagctgagtgacgacctgcgtctccagcagcaggcggccacaggccctgccctggac
aacaagaagtgcacaccgcccattgaggccagccagtgccacgaggccgtgcccaccgac
aacgccaaccagctgctgctgcttgacctgcccggaaagcgcctggtggagtgcggcagc
ctcttcaagggcatctgtgccctgcgcgccctgagcaacatctccgtgcgcctcttctat
gaggacggcagcggtgagaagtcctttgtggccagcaatgatgagagcgtggccactgtg
gggctggtcagctccacaggccctggtggggagcgtgtgctgttcgtgggcaaaggcaac
gggccttacgacaacggcatcatcgtgagcacccgcctgctggaccggacagagggcagg
gaggccttcgaggcctactcggaccacaccaccttcaaggctggctacctgtccaccaac
acacagcagttcgtggcggcctttgaggatggcccgtacgtcttcttcgtcttcaaccag
caggacaagcacccggcccggaaccgcacgctcctggcacgcatgtgcaaggaggactcc
tcctactactcctacgtggagatggacctgcagtgcagggaacccagcgacccccagggc
cctgccttcggcgcctgcctggcagcctctgtggccacaccgggtgccagcagggtgctc
tatgctgtcttcagcagggatggccggagcagtggggggccaggggcaggcctctgcctg
ttcccgctggaggaagtccatgccaagatggaggccaaccgcaatgcctgctacacgggc
tcccgggaggccagccgggacaccttctataagcccttccacggcgagatccagtgtggg
ggccacgtgctgggggccagtgagaacttcccgtgtggttcagagcacctgccctacccg
ctgggcagccgcgatgggctcacagccatggctgtgctgcagcgtggaggcctgaacctg
acggctgtgacagtgaccgccgagaacggccacactgttgctttcctaggcacctctgac
ggccggatcctcaaggtgtacctggcccctgaccgcacctcagaggagtacagctccatc
cttgtggagatcaacaagagaatcaagcgggacctggtgctgtctggagatctgtccagt
ctgtatgctatgacccaggacaaggtgttccggctcccagtgcaggagtgcctgagctac
ctgacctgcgcacagtgccgcgactcccaggacccctactgcggctggtgtgtcgtcgag
gggcgatgcaccaggagggctgaatgcccgcgggccaaggagactggccactggctgtgg
agccgggacaagtcctgtgtaaccatcattgatgcccagcctcagaacatgagccgtcgg
gctcagggggaggtgcagctgactgtcagccctctcccagccctgaccgaggaggacgag
ttgctgtgtctctttggtgaatcgccaccacaccctgcccgagtggagggagatgccgtt
gtctgcaactccccaagcagcatccccagcacaccacccggtcaagaccacgtggctgtg
agcatccagctcctcttcagacgggatgacgtcttcctcacctctcaccagtaccccttc
tatgattgccgagaggccatgagcctggtggagaacctgccgtgcatttcctgtgccagc
aaccgctggacctgccagtgggacctgcggtaccacgagtgccgggaggcctcgcccaat
cccgaggatggcatcatccgtgcccacatggaggacaactgcccccagttcctgaacccc
agccctctggtcatccccatgagccatgagacagatgtgatcttccagggcaagaacctg
gacacagtgaaggggtcctccctgcatgtgggcagcgacctgctcaagtttgaggagtca
gtgaccatgcaggagcgagggaccttcttctttcggaccccaaagctgtcccacgatgcc
aacgagactctgccggtacacctgtacgtcaagtcctatggcaagaacattgacagcaaa
ctccaagtgaccctctacaactgctcctttggccgcagtgactgtagcctgtgcctggct
gctgaccctgcctacaggtgcgtgtggtgccgtgagcagagccgctgtgtgtatggggct
ctctgcagcaacgccacgtctgagtgcccaccaccggtcatcaccaggatccagcctgag
accggtcccctgggcgggggaatccgtgtcaccatccttgggtccaatttgggcatcaaa
gcagatgatgttaagaggatcactgtggctggaaagaactgtgcctttgagcccgaacgg
tactctgtgtctacccggatcgtgtgtgtgacggaggccgcagagacgccctccactggg
ggtgtcgaggtggatgtcagcgggaagcttggccactcaccacccagtgtccaatttacc
taccaacagccccagcctctcagtgtggaaccaaggcaggggccacaagcaggcgggacc
acgctgaccatcaatggcacccatctggacacaggctctaaggaagacgtgcgggtgacc
ctcagtgacgtcccttgtgaagtgaccaagtttggggtacagctgcagtgcatcacagga
ccccaggccactctgggagaggtggccctggagatctcctatgggggctcccttgtgccc
agccctggcgtctccttcaccttccgcgagaatccagtgctgcgggcctttgagccactg
cgaagctttgtcagtggtggccggagcatcaacgttaccggtcagggcttcagcctcatc
cagaaattcgccatggtggtcatcgccgagcccctccagtcctggcggcgtcggcgggaa
gctggacccctgcagcccacagtggtcacgggcaccaagtatgtcttctacaatgacacc
agagtcgtcttcttgtcccccgctgtgcccgaggagcctgaagcctacaacctcacggca
ctgatacagatggatgggcaccgtgccctgctcaggacagaggccggtgccttcgagtac
gtggcagaccccacctttgagaacttcacaggtggcgtcaagaagcaggtcaacaagctc
atccacgcccggggcaccaacctgaacaaggcgatgacgctgcaggaggctgaggccttc
gtgggcgctgagcgctgcatcatgaagacgctcaccgagactgacctgtactgcgagccc
cctgaggtgcagcccccacccaagcggcggcagaagcgggacaccacacacaacctgcct
gagttcattgtgaagttcggctcccgcgagtgggtgctgggccgcgtggagtacgacacg
cgcgtgagtgacgtgccgctcagcctcatcctgccgctggtcatcgtgccaatggtggtt
gtcattgccgtgtccgtctactgctactggaggaagagccagcaggcggagcgtgagtac
gagaagatcaagtcccagctagaaggcctggaggagagtgtgcgagaccgctgcaagaag
gagttcaccgacctgatgatcgaaatggaggaccagacgaacgacgtgcacgaggcgggc
atccccacgctggactacaagacctacactgaccgcgtcttcttcctgccctccaaggac
ggcgacaaggacgtcatgatcactggcaagctggacatacccgagtcgcggcggcccgtg
gtggagcaggctctctaccagttctccaacctgctcaacagcaagtccttcctcatcaat
ttcatccacaccctggagggccagcgcgagttctccgcccgggccaaggtctactttgcc
tcgctgctgacggtggcgctgcacgggaagctcgagtactacacggacatcatgcgcacg
ctcttcctggagctcatggagcagtacgtggtggccaagaaccccaagctgatgctgcgc
aggtctgagaccgtggtagagaggatgctgtccaactggatgtccatctgcctgtaccag
tacctcaaggacagtgctggtgagcccctatacaagctcttcaaggccatcaaacatcag
gtggagaaggggcctgtggatgccgtgcagaagaaggccaagtacaccctcaatgacacg
gggctgctgggggacgacgtggagtacgcgcccctgacagtgagcgtgattgtgcaggac
gaaggggtcgacgctgtgccggtcaaggtcctcaactgcgacaccatctctcaggtcaag
gagaagatcatcgaccaagtgtaccgtacacagccctgctcctgctggcccaagccggac
agcgtggtcctggagtggcgccctgggtccacagcccagatcctgtctgacctggacctg
acctcccagcgggaaggccgatggaagcgcataaataccctgatgcactacaatgtccgg
gatggagccaccctcatcctgtctaaggtgggggtctcccagcagccggaggacagccag
caagacctgcctggggaacgccatgccctcctggaggaggagaaccgggtatggcacctg
gtgcggccagcagatgaggtggacgagggcaagtccaagcgaggcagcatgaaggagaaa
gagcgaaccaaggccatcaccgagatttacctgacgcgactgctctcagtcaagggaaca
ctgcagcagttcgtcgacaacttcttccagagtgtgctggcgcctgggcacgcagtgccg
ccggccgtcaagtacttcttcgacttcctggacgagcaggcagagaagcatgacatcaag
gacgaggacaccatccacatctggaagaccaacagtttaccgctccggttctgggtgaac
atccttaagaacccgcatttcatctttgatgtgcacgtccatgaggtggtggacgcctcg
ctgtcggtcatcgcgcagaccttcatggacgcctgcacacgcacggagcacaagctgagc
cgagactctcccagcaacaagcttctgtatgccaaggagatctctacctacaagaagatg
gtggaggattactacaaggggattcggcagatggtgcaggtcagcgatcaagacatgaac
acacacctggcagagatttcccgggcacacacagactccctgaacacccttgtggcactg
caccagctctaccagtacacgcagaagtactatgatgagatcatcaatgccttggaagag
gaccctgctgcccagaaaatgcagctggccttccgcctgcagcaaatcgcggctgctctc
gagaacaaagtcaccgacctctga
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