Notothenia coriiceps (black rockcod): 104941880
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Entry
104941880 CDS
T04920
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104941880
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104941880
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104941880
NCBI-ProteinID:
XP_010765349
UniProt:
A0A6I9MFN7
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Position
Unknown
AA seq
522 aa
AA seq
DB search
MADSLCHLPPKASSQKVTERGKWDSKKEFILSVAGAIIGLGNVWRFPYLCYKNGGGAFFI
PYILFLVTCGVPLFILEVSLGQYTSQGGIMCWRMVCPLLEGIGYASQIIIFYGCISYVVI
LAWAFLYFFASFSAELPWATCNNTWNTDSCVVLNNFNATANWTSPVNASSSILEFWQRRV
LNISTGIEVLGNIQGDLALYLLLAWALCYFCVWKGVRSTGKRNKDTLIVHCSFCRDSFYL
CLLNSGTSFISGFAIFSVLGYMSQKQGVDIASVADSGPGLVFIVYPQAVTLLPFPRFWSM
CFFIMIILLGIDGQFVGLESLMTSLSDVYPSQIRKGYRRELLLLLICAVSYMLGLVLVSQ
AGAYILSIFDHYVCSGPTLLLMAIFQSVIIGWIYGADRFCDNIEDMIGYKPMSLLKYCWM
YATPLICSGTLVFMLLKYTPLKFNNSYVYPWWAYWIGWFLAMSSLSMIPVTMVCKLAKEK
GTLWQRIKLCSRPADDLTMRTTTNASISASLQAPDTGQNIKV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctctgtgccatctccctcctaaggcttcttcacaaaaagtcacagagcgt
ggcaaatgggacagcaaaaaggagttcattctgtcggtggctggtgctattattggactg
ggaaatgtgtggagatttccatatctgtgctacaaaaatggtggtggtgccttcttcatt
ccttacatcctgttccttgtgacctgtggcgttcctctgttcatactggaggtatccctg
ggccagtacaccagtcagggaggaatcatgtgctggagaatggtctgtcccttgttggaa
ggcataggatacgccagccaaattatcattttctatggctgtatcagctacgttgtgatt
ttagcctgggcttttctctacttttttgcctcattctctgctgagctgccatgggccaca
tgcaataacacatggaatacagattcttgtgtggtattgaacaactttaacgccactgct
aactggacctcgcctgtgaatgcatcgtcgtctatactagagttttggcaacgacgagtg
ctgaatatctccactggcatagaggtattgggaaacatacagggggaccttgctttgtac
cttcttctggcatgggccctctgctacttctgcgtctggaagggagtgagatccacggga
aagagaaataaagacacattgattgtgcattgttccttttgcagagactccttctatctt
tgcttgttaaacagcgggaccagctttatatctggatttgccattttctcagttttgggc
tacatgtcacaaaaacagggtgtcgacattgcttcagttgccgactcaggccccggcctc
gtgttcatagtctacccacaagctgtgacccttctgccgtttcctcgattctggtcgatg
tgtttcttcatcatgatcatcttgttaggaatagatggacagtttgttgggcttgaaagt
ctcatgacctctctatcagacgtctacccatcccagatccgaaaaggatatcgcagagag
cttcttctgctgctgatctgtgctgtctcctatatgttaggcctcgttttggtgtcacag
gccggagcatacattctgtcgatatttgatcactatgtatgcagtggtcccactctgctt
ctgatggcaatcttccagtctgtaattattggatggatctatggtgctgaccgcttctgt
gacaacattgaggacatgattgggtataaacctatgtccctgttaaagtactgctggatg
tatgccacacctcttatttgtagtggcacacttgtgtttatgctcctgaaatacacccct
ctgaagttcaacaactcctacgtgtatccttggtgggcatactggatcggctggttcctg
gccatgtcatctctctcgatgattcctgtgaccatggtctgcaaactggccaaagaaaaa
ggaactctctggcagcgtatcaagttatgctcccgacctgcagatgatcttacaatgagg
acaacgacaaatgcaagcatcagcgcctccctgcaagcccctgatactggacaaaacatc
aaagtgtaa
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