Notothenia coriiceps (black rockcod): 104942376
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Entry
104942376 CDS
T04920
Symbol
pdss1
Name
(RefSeq) decaprenyl-diphosphate synthase subunit 1
KO
K12504
decaprenyl-diphosphate synthase subunit 1 [EC:
2.5.1.91
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104942376 (pdss1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ncc01006
]
104942376 (pdss1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
104942376 (pdss1)
Prenyltransferases [BR:
ncc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104942376 (pdss1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
104942376
NCBI-ProteinID:
XP_010765891
UniProt:
A0A6I9MVJ2
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MACPLLRQCSKWNANCSSLFETLWYGNGRPVSFSTSSLGRTSWSSGPGNAGQPSALRRRT
GPNTFNFITSLTRHKPRLLDPSLKSCFCINSAHTDVKVQDPFTIAQKDLNNLYDDIRKEL
FVTKELKALCHYYFDGKGKAIRPMIVVLMARALNSHSNRSGELLPGQRAVAMITEMIHTA
SLVHDDVIDGSNKRRGKGTINELWGEKKAILAGDFILSVASITMARIGNNMVVKVFSQVI
EDLVRGEFMQLGSKENENERFKHYLEKTFKKTASLIANSCKAVCVLVSSDPKVHEIAYQY
GKNVGIAFQLVDDVLDFTSGANHLGKPSAADLKLGLATGPVLFACQQFPELHSMIMRRFS
SKGDVDRAWQYVFQSDGVEQTKNLAQHYCQEAIRQISMLRPSAERDALIRLTEMVLTRDK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccattgcttaggcaatgctcgaagtggaatgcaaactgttcgagtttattc
gaaacgttgtggtatggtaatggcaggccggtgtcattctccacatcttctctggggcgg
acatcctggagctctgggccggggaacgcggggcagccatcagccctgcgaagacggaca
ggtccaaacactttcaactttatcacatctctcaccagacacaaaccacggttgctggat
ccctcactaaagtcttgcttttgcataaacagtgcacacacagatgtgaaggttcaggac
cccttcacaatagcacagaaagatctcaataatttatatgatgacatcagaaaggagctg
tttgtaactaaagagctgaaggctttatgtcattactactttgacggaaaaggcaaggcc
atccgaccaatgatagttgtcctgatggcgcgggcactcaacagccacagcaacagatcc
ggagaattgctcccagggcagagggccgtagctatgatcacagaaatgatccacactgcc
agcctggtgcatgatgacgttatagacggatctaataaacgaagggggaagggaaccatc
aatgaactgtggggtgaaaaaaaggcaatcttggctggagatttcatcctatcagttgcc
tccataaccatggcgcgaattggtaacaacatggttgtaaaggtgttttcccaggtgata
gaggatctggtgcgaggtgaattcatgcagctgggctccaaagagaacgagaacgagaga
ttcaaacactacctggagaaaaccttcaagaagacagcgagtctgattgcaaacagttgt
aaagcagtatgcgttctagtaagttctgatcctaaggtccatgaaatagcctaccagtac
gggaagaatgttggcatcgcatttcagctggtagatgatgttttggacttcacatcaggg
gccaaccacctggggaagccctcggctgcagatctcaaactgggcctggccactggaccg
gtgctgtttgcctgtcaacagtttcccgagctccactcaatgatcatgagacgtttcagc
tctaaaggagacgtagatcgagcctggcagtacgtctttcagagcgacggcgtggaacag
accaaaaacctggcgcagcactactgtcaggaggccatcagacagatcagtatgctcagg
ccgtcggcggagagagacgccctcatcagactcactgagatggtgctcaccagagacaag
tga
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