Notothenia coriiceps (black rockcod): 104945375
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Entry
104945375 CDS
T04920
Symbol
nefm
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104945375 (nefm)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
104945375 (nefm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF4211
FeoC
Motif
Other DBs
NCBI-GeneID:
104945375
NCBI-ProteinID:
XP_010769332
UniProt:
A0A6I9MY95
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MSYTVDTSGSPFRRIMDTRTTGYGYSRSGSSPSSGFRSQSWSRASPGSTMTTSYKRSVNM
PVSRAYSSTVLSSVDSGDYQTSMMNGDFKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNKQ
IEDEIQALRQKQVSRSQLGDHYDQELQDLRSMLEQINHDKTQIQLDTDHVEEDIQRLRDR
YDEEARIREETEAIIRVLRKDMSESELVKSELDKKVQSLQDEIAFIRNNHEEEVSELIAQ
IEESQVTVERKDLHKTDITEALREIRCELEGHSNQNLQQVENLFMCRYSKLTEAADQNKD
AIKSARDEISDYRRQLQSKTVELEAIRRTRESLERQLNEIEDRHSSDLSSLQETIHQLDN
ELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTPTKVFK
SKSDVPKLRVQHKFVEEIIEETRVEDEAEDFDEALAEIAQELSATLGGGGDEGEEEEGEE
GGEGEEEEGDEQEGEGEGVEEEVVAATKAKVSSSAPAKEEEEEDDGKDEDEEGEGGEEEE
KEEDGEGEDEGEKGDDAEGGDEVEGDDVGEDEEEIEETVLCSKAPESKASPDQEKAGDKE
GSGGEEEAGADEEDGEQDEDAGSDKASKSVDEKEDKEDAEKTTKEDSKTDEKKEEDKSEE
VVAKTDASKTESAKPESKKEDAAKTEASKPDSPKSESPKLGSPKSESPKLGSPKSESPKL
GSPKSESPKLGSPKSESPKLGSPKSESPKLGSPKSESPKLGSPKSESPKLESPKSETPKL
GSPKSETPKLGSPKSESPKLGSPKSESPKPESLKSEIPKPTSLKPESPKPSSPKAESPKS
ESPKPESPKAKSPKTPLPETPKAAEEKSEKKSDLTEEKNVEKKDVAMNGDEDKSSPEEKK
DEEKESDMVSNGIDESTVKEDGSQKVVITKTVETITTGEDGSKRVTKSVTVTETVKDEVE
EVKEEVLVSTKKTEKHSSMSIKQVTEHE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacggtggacacttcagggagccccttcaggagaattatggatactaggacg
accggctacggctacagccgctccggcagctccccctccagcgggttccgctcccagtcc
tggtcccgggcaagccccggctccaccatgaccacgtcctacaagaggagcgtgaatatg
ccggtgtcccgagcctacagctccacggtgctcagctccgtagatagcggtgactaccag
acctccatgatgaacggagacttcaagcgatccaatgagaaggagcaacttcaagggctc
aacgaccgcttcgttgtttacatcgacaaggtgcactacctggagcagcagaacaagcag
atcgaggacgaaatccaggcgctgcgccagaagcaggtgtcccgctcccagctgggcgat
cactacgaccaggagctgcaggatctgcggtccatgctggagcagatcaaccacgacaag
acgcagatccagctcgacaccgaccatgtcgaggaggacatccagcgtctgagggaccgc
tatgacgaagaggctcgcatccgggaggagaccgaagccattatccgcgtcctgaggaag
gacatgagcgagtcggagttggtgaagtctgagttggataagaaagttcaatctctgcag
gatgagatcgccttcatccgcaacaaccacgaggaagaggtgagcgagctgatcgcccag
atcgaggagtctcaggtgaccgtggagaggaaggatctgcataaaacggacatcaccgag
gctctgcgggagatccgctgcgagctggagggtcactccaaccagaacctgcagcaggtg
gagaacttgttcatgtgccgctactccaagctcaccgaggctgcagatcagaacaaggac
gccataaagtccgcccgtgatgagatatcagactaccgccgccagctccagtccaagacg
gtggagttagaagccatccgcaggacaagagagtctctggagaggcagctgaatgaaatc
gaggaccgccacagcagcgatctgtccagccttcaggagacaattcaccagctggataat
gagctcaagagtaccaaatgggagatggcacgtcacctgcgcgagtaccaggacctgctc
aatgtcaagatggcattggacattgagattgctgcatacaggaaactcctagagggcgag
gagactcacttcagcactttcccctatcgccaggcggtcacccccacaaaagtctttaag
tctaaatctgatgttcccaagcttagggtgcaacacaagtttgtcgaggagatcatcgag
gagacgagggtggaagatgaggcagaagactttgacgaagccctggcagagatagcacaa
gagctgtccgctacactcggaggtggaggagacgagggagaggaagaggagggggaagag
ggaggtgagggagaggaagaagagggtgatgagcaagagggggagggggaaggtgttgag
gaggaagttgtagccgccaccaaagccaaagttagctctagcgcacctgctaaggaggaa
gaagaagaggatgatggaaaagacgaggatgaggaaggagagggaggtgaagaagaagag
aaggaagaagatggtgagggggaagatgaaggagaaaagggggatgacgcagagggaggt
gatgaagtagaaggagacgatgtaggagaggatgaggaggaaattgaggagacagtgctc
tgctccaaagcgcccgagtctaaagcctctcctgaccaagagaaggccggagacaaggaa
ggcagcggaggagaagaggaagctggtgccgatgaagaagatggagaacaggacgaagat
gccggcagtgacaaagcctccaagagcgtagacgagaaagaggataaagaggatgctgag
aaaaccacaaaggaagatagcaaaacagacgagaagaaagaggaagacaaatcagaagaa
gttgtagccaagacagacgcttcaaaaacagaatctgcaaagcccgagtccaagaaagaa
gacgcagccaaaactgaggcatcaaaacctgattccccaaagtctgagtctcctaaactt
ggatccccaaagtctgaatctcctaaacttggatccccaaagtctgaatctcctaaactt
ggatccccaaagtctgagtctcctaaacttggatccccaaagtctgagtctcctaaactt
ggatccccaaagtctgagtctcctaaacttggatccccaaagtctgagtcccctaaactt
ggatccccaaagtctgagtcccctaaacttgaatccccaaagtctgagacccctaaactt
ggatccccaaagtctgagacccctaaacttggatccccaaagtctgaatctcctaaactt
ggatccccaaagtctgaatctcctaaacctgagtcccttaaatctgaaattcccaagcct
acatctctgaagcctgaatccccaaaaccaagctccccaaaagcagagtctcccaagtct
gaatctccaaaacctgaatctcctaaagctaaatccccaaagacccccctgcccgagacc
cctaaagccgctgaagagaaatcagagaaaaagagcgacctaacagaggagaagaatgtt
gaaaagaaggatgttgccatgaacggcgatgaagacaagagcagcccagaggagaagaag
gacgaggagaaagaatccgacatggtctctaacggcattgacgagagtacggtcaaagag
gacggtagccaaaaagtagtgatcaccaaaaccgtggagacgatcaccactggagaggat
ggatccaagcgcgtcaccaaatctgtcactgtgaccgagacagtgaaggacgaggtggag
gaggtgaaagaggaggtgctggtgtccaccaagaagacagagaagcactcctccatgtcc
atcaagcaggtgacagagcacgaataa
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