Notothenia coriiceps (black rockcod): 104952636
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Entry
104952636 CDS
T04920
Symbol
jag1
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04330
Notch signaling pathway
ncc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104952636 (jag1)
04371 Apelin signaling pathway
104952636 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncc04090
]
104952636 (jag1)
CD molecules [BR:
ncc04090
]
Proteins
104952636 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
DL-JAG_EGF-like
DSL
EGF_2
JAG1-like_EGF2
EGF_CA
cEGF
Glt_symporter
Motif
Other DBs
NCBI-GeneID:
104952636
NCBI-ProteinID:
XP_010777824
UniProt:
A0A6I9NJM5
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MILRRGSVVAAFLLCFLAKVSEGSGQFELQILSMHNANGELLNGMCCDGTRTTADRKCTR
DQCNTFFRVCLKEYQSRVSVAGPCSFGMGSTPVLGGNTFSFKSSVRNDKSRIVLAFSFAW
PRSYTLIVEALDFKNETGGADGKLIEKASHSGMINPSPHWQKLTHNDRVAQFEYQIRVSC
DEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGLDCNTAICRQGCSTEHGSCKE
PGGCKCLYGWQGQYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGHLCDKDLNYCGTHQPCM
NGGTCINTGPDKYQCTCAEGYSGANCERAEHACLSNPCSNGGSCSETSQGYECQCAPGWS
GPSCTTNVDDCSPNPCNHAGTCQDQVNGFKCHCPSQWSGKTCLIDANECESKPCVNANSC
RNLIGGYFCECVPGWTGQNCDTNINDCKDQCQNGGTCKDLVNGYRCACPPGFAGDHCERD
IDECASAPCLNGGRCQDEVNGFQCLCLAGFSGNLCQLDIDYCSPNPCQNGAPCFNLATDY
YCACPEDYEGKNCSHLKDHCRTNTCKVIDSCTVSVASNSTPGGERYISSNVCGPHGRCRS
QAAGQFSCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVSVYQCICGDGWEGDHCEIN
IDDCSTNPCHNGGTCRDLVTDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCHDEVNTF
QCKCSPGWEGTTCNIAKNSSCLPNPCENGGTCVVTGESFACVCKEGWEGPTCTQNTNDCS
PHPCYNSGTCVDGDNWYRCECAAGFAGPDCRIKPLLTSRSSPPVTDINECQSSPCAFGSN
CVDEINGYRCLCPPDRTGPHCHEETKKHCSVNGRDFLDGLRWEEDCNTCHCSNGKVVCTK
MSCGPMSCHIGAKGRGGCPSGRSCVPIREDHCFVKPCVGLGECWRSNPPPRPTECHPSSS
YQDNSCANITFTFNKETMPQSLTVEDVCKQLRRLYVVKNFSLEHSVSITCDPSFSASNEI
HVCIAMEDHRLDRSPIKELTDRIIDLVSKGNGNNNNNSNNTIIAAIIEVRVPSPSKTDYL
VPLLSSVFIVIWVLVLVSVLLWCMRRRRKPSNHNGPPATGAEDNTTNNVREQLNQIKNPI
EKHSGLTVAIKDYENKNSIIAKIRTNHPEGNEDDKERHLQKGRFAKQPAYTLVERDEKTP
VSNSTSKNPNWTNKQDNRDLETANSINRMDYIV
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacggggctcagtcgttgctgcctttttactctgctttctggccaaggtg
tcagagggatcgggacaattcgagttgcaaatcttatcgatgcacaatgcaaacggagag
ctgctgaacggcatgtgttgtgatggcacacggaccacggcggatagaaaatgcacacgg
gaccagtgcaatacgtttttcagagtttgcctgaaggaataccagtccagagtttctgtt
gcagggccctgcagcttcggaatgggatctacgcctgtcctcggaggaaataccttttct
ttcaagagttctgtcaggaatgacaaatccaggattgttttggccttcagttttgcctgg
ccgaggtcctacactttgatagtggaagccttggacttcaaaaatgaaaccggtggtgca
gatgggaagttgatagagaaagcctctcattcaggcatgatcaaccccagcccgcattgg
caaaagctgactcacaacgaccgtgtggcccagtttgagtaccagatccgggtcagctgt
gacgagcactactacggcttcggctgcaacaagttctgtcggccgagggatgagttcttc
gggcattacacatgcgactacaatggaaacaagacatgtctggaaggctggtccggactt
gactgcaacacagctatatgtcgacaaggctgcagcactgaacatggatcatgtaaggag
ccaggtggatgcaagtgtctttatggctggcagggccagtactgtgacaagtgcatcccc
caccccggctgtgtacacggcacctgtgtagagccgtggcagtgcctgtgcgacaccaac
tggggcggccacctttgcgataaagatctgaactattgtggcactcaccagccatgcatg
aatggagggacgtgtatcaacacagggcctgacaagtaccagtgtacctgtgctgaaggc
tactctggggcaaactgtgagagagcggaacatgcctgtctatccaatccatgctctaac
ggcgggagctgttcagaaaccagtcaaggctacgaatgtcagtgtgcaccaggctggagc
ggcccctcctgcaccaccaatgttgacgactgctctccaaacccctgcaatcacgcggga
acgtgccaggatcaagtgaacggtttcaagtgtcactgtccttcacagtggtcggggaag
acgtgtctgatagatgccaacgaatgcgaaagcaagccctgtgtcaatgccaactcgtgc
cgcaacctgattggtggatacttctgcgagtgcgtccctggttggacggggcagaactgc
gacaccaacattaacgactgcaaggaccagtgccagaatgggggaacttgcaaggacttg
gttaacggctatcgttgcgcgtgcccccctggcttcgccggcgatcattgtgagagggac
atcgacgagtgtgcgagcgcgccgtgtctgaacggcggccgctgtcaggacgaagtcaac
ggcttccagtgcctgtgtctggcaggcttctcaggaaacctctgccagctggatatcgat
tactgctcgcccaacccgtgtcagaacggagcgccctgcttcaacctggccacagactac
tactgcgcctgccccgaggactacgagggcaagaactgttcccacctcaaagaccactgt
cgcaccaacacgtgtaaagtgattgacagctgcaccgtgtccgtggcgtctaacagcacg
ccgggaggggagcgctacatttcatccaatgtgtgtggacctcacgggcgctgccggagc
caggccgcgggccagttcagctgcgagtgccaagagggcttcagaggcacctactgccac
gagaacatcaacgactgcgagagtaatccatgtcgcaacggaggcacctgcatcgacaaa
gtcagcgtgtaccagtgcatctgcggcgacggttgggagggcgaccactgcgagatcaac
atcgatgactgcagcaccaacccctgtcataatggagggacatgtcgagacctggtgact
gatttcttttgcgaatgcaagaatggctggaagggaaagacctgccactcccgtgaaagc
cagtgcgatgaagccacatgtaacaacggtggcacctgccatgacgaggtcaacacgttc
cagtgcaagtgttccccagggtgggagggtaccacatgtaacatagccaaaaactcaagt
tgccttcccaacccgtgtgagaatggaggaacctgcgtggtgactggggagtcgttcgcc
tgcgtctgcaaggaaggctgggagggtcccacgtgcacccagaataccaacgactgcagt
ccccacccatgctacaacagcgggacctgtgtggacggggataactggtaccgctgcgag
tgtgctgcaggcttcgctggtccagactgccggatcaagccacttcttacctctcgctct
tcccctcctgtgacagatattaatgagtgccagtcctctccctgtgcctttggctccaac
tgtgtggatgagatcaacggctatcgttgcctgtgtcccccggacaggacgggaccccac
tgtcatgaagagacgaaaaaacattgctctgttaatggacgtgacttcctcgatggtctc
agatgggaggaagactgcaacacctgccactgttcgaacgggaaagttgtgtgcacaaag
atgtcatgtggccctatgtcctgccacataggggccaaaggtcgcggcgggtgtccctct
ggtcggagctgcgtccccatcagggaggaccattgctttgtgaagccctgcgtcggcctg
ggggagtgctggcgctccaaccctcccccgcgtcccaccgaatgccaccccagctccagt
taccaggacaacagctgcgccaacatcaccttcaccttcaacaaggagaccatgcctcaa
agcctgaccgtggaggatgtgtgtaagcagctgaggcgcctgtacgtggtgaagaatttc
tccttggagcattctgtgtccataacctgtgacccctcattctcagccagcaacgaaatc
cacgtctgcatcgctatggaggaccatcggttggaccgtagtcctattaaagagctcaca
gacaggataatcgacctggttagcaagggcaacgggaacaacaacaacaacagcaacaac
accatcatcgccgccatcatagaagtgcgcgtgccaagccccagcaaaacggactaccta
gtgcccctcctcagctccgtcttcattgtcatctgggttctcgtcctggtctctgtgttg
ctgtggtgcatgcggcgccggcggaaaccgagcaaccacaacgggccgccggccaccggt
gccgaggacaacacgaccaacaacgtgagggagcagctcaaccagatcaagaaccctata
gagaagcactcgggcctcacggtggccatcaaagactacgaaaacaagaactccatcatt
gccaaaataaggacaaatcatcccgaggggaatgaggacgacaaggagaggcacttacag
aagggccgcttcgccaaacagccagcgtacacactggtggagcgggacgagaagacgccg
gtttccaactccacatccaaaaaccctaattggactaataaacaggacaacagagacttg
gagacagcaaacagcataaacaggatggactacattgtatag
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