Notothenia coriiceps (black rockcod): 104967098
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Entry
104967098 CDS
T04920
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104967098 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104967098 (rae1)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104967098 (rae1)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104967098 (rae1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104967098 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
104967098
NCBI-ProteinID:
XP_010794800
UniProt:
A0A6I9Q253
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGTTSGFGAGGTGVFGNATTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERSYCADVVY
PMAVVATADRGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACAFNSNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggacaacctccgggtttggagcaggagggacaggtgtctttggaaat
gcaacaacagacagccacaatcccatgaaggatgttgaagtgacttcacctccagatgac
agcatcagctgtctggctttcagtcctcccaccatgccagggaacttccttattggagga
tcctgggccaacgatgtccggtgctgggaggttcaggacaatggacagactgtcccaaaa
gcccaacagatgcacacaggtccagttctggatgcatgctggagcgacgacgggagtaaa
gtcttcacggcttcctgtgacaaaacagccaagatgtgggatcttaacagcaatcaagca
atgcagattgcacagcatgagggcccgatcaaatcaatccactggataaaagccccgaac
tacagctgcatcatgactggcagttgggacaaaacactgaagttctgggacacccgctct
cccaatcccatgatgtctctgcagatgccggagagaagctactgtgcagatgttgtgtac
cccatggcggtggtagccacagctgatagaggcctgatagtttaccaactggagaaccaa
ccctctgagtttcgcagaatagactcacctctcaaacatcagcaccgctgtgttgccata
ttcaaggacaagcagaacaagcccacaggctttgcactgggtagcattgagggccgagtg
gccatccactacatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtcgaatggaaccaacaccaccactccacaggacatctatgctgtcaatgccatctcc
ttccatcctgtccacggcactctggcgactgtgggctcagacgggcgcttcagcttctgg
gacaaagacgcccgcaccaagctgaagacctcggagcagctggaccagcccatcactgcc
tgcgccttcaacagcaatggcaacatctttgcatacgcctccagttacgactggtcgaag
ggacatgagtactacaacccccagaaaaagaactacatcttcttgaggaacgctgccgag
gagctgaagcctcggaacaagaaatggtga
DBGET
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