Nocardiopsis changdeensis: KGD84_31635
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Entry
KGD84_31635 CDS
T08932
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ncg
Nocardiopsis changdeensis
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncg03021
]
KGD84_31635 (sigM)
Transcription machinery [BR:
ncg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KGD84_31635 (sigM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
DUF134
HTH_17
DUF2740
Motif
Other DBs
NCBI-ProteinID:
QUX22774
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All DBs
Position
7098348..7098974
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AA seq
208 aa
AA seq
DB search
MDAVQELPDRELLTRHTQGDDQAFAVLVRRHRDRLWAVAVRMMGDPEEASDALQDAFLSA
FRSADRFRGESQVTTWLHRIVVNACHDRLRRRKVRPATPTEVDTLDVLSNERLGRTGGAP
DHASQTESRLDVHAALDTLPLDQRMALTLVDMLGYRVEEAAQILDVATGTVKSRCARGRA
KLLPSLAHLRNPRPPRDVTTGRGGADPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtccaagagcttcctgaccgggaactgctcaccaggcacacccagggggac
gatcaggcgttcgcggtgctcgtgcgccgccaccgcgatcgcctctgggccgtcgccgtg
cgcatgatgggcgaccccgaggaggcctccgacgccctccaggacgcgttcctgtccgcg
ttccgctccgccgaccgcttccgcggcgagtcccaggtcaccacctggctgcaccgcatc
gtcgtcaacgcctgccacgaccggctgcgccggcgcaaggtccgcccggccacccccacc
gaggtcgacaccctcgacgtgctctccaacgagcggctgggccgcaccggcggcgccccc
gaccacgcctcccagaccgagtcgcggctggacgtccacgcggccctggacaccctcccc
ctggaccagcgcatggccctcaccctggtcgacatgctcggctaccgggttgaggaggcc
gcgcagatcctcgacgtcgccaccgggacggtcaagagccggtgtgcgcgaggtcgcgcc
aaacttcttccgtctctcgcccacctgaggaaccctcgtcccccccgagacgtcacaact
gggagaggaggtgccgacccatcgtga
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