Neoasaia chiangmaiensis: A0U93_06320
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Entry
A0U93_06320 CDS
T04705
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nch
Neoasaia chiangmaiensis
Pathway
nch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A0U93_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nch03021
]
A0U93_06320
03400 DNA repair and recombination proteins [BR:
nch03400
]
A0U93_06320
Enzymes [BR:
nch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0U93_06320
Transcription machinery [BR:
nch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A0U93_06320
DNA repair and recombination proteins [BR:
nch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A0U93_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF6218
Bac_rhamnosid_C
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AQS87615
UniProt:
A0A1U9KP78
LinkDB
All DBs
Position
complement(1334950..1339125)
Genome browser
AA seq
1391 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGRIPEVAPMPNLIDVQRASYEAFLQMNVSPDSRQQAGLQEVF
RSVFPINDFAGRGRLEFVSYELEEPKYDVEECIQRGLTFAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYL
FAARVIPYRGSWLDFEFDAKDLIYVRIDRKRKLPVTTLLYALEGENSIAARAAKAEEGGD
VDAMPIRGMDQDEILGYFYNEVPFTRMPKGWARPFDPEAFRGLKLLEPLYDADTGEVVAE
ADAKLTARAVRKIAENTRVVLVGRADLLGRFVAHDLVNEHTGEIYAEAGEELTEARLAAL
EDAGVTELPMLSVDGQHGPWIRNTLAVDKNMSRDDALVDIYRIMRPGEPPTPETAEAMFR
GLFFDPDRYDLSAVGRVKMNMRLEVDAPDTLRVLRKEDILRTVKIMCELKDGRGQIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLSTYAKVNKYGFIETPYRLVKDGVLQDGWKYLSAMEEDKLIVAQADAKQNKE
TGELTDELVSVRRSGDFRLVPPEQVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNM
QRQAVPLVRADAPLVGTGMEAAVAHDSGATIVAKRNGVVDQIDGARIVVRATDVAGATQG
VDIYRLRKYMRSNQSTCINQRPLVRVGDTVHAGDIIADGPSTELGELALGRNVLVAFMPW
NGYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEESLRNLDE
AGIVYVGAEVNPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGT
IVDVRVFSRRGVDKDERAMAIERAEIERLTKDRDDERAIQERSFLNRLRERLLNQTAGAG
FKGIKSGTVITEDVLAEHPRGAWRNIVVSDDSVMSEIETLRREFDAAVGRIQARFDSKVE
KLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTAV
DLVLNPLGVPSRMNVGQILETHLGWACANLGQDIGRLADDYQRTGEKKQELLDRLKDVYG
DDIYTSDIATLPNEQLMELAGNLRKGVPIATPVFDGASIPDIEDMLAKAGVDKSGQSQLI
DGRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREHDDFEAGIPESFNVLIKELKSL
GLNVDLEQSGS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcaccaaatcgttcacgggacgcaagcgtattcgcaagagcttcgggcgc
atccccgaagtcgcaccgatgcccaatctgatcgacgtgcagcgtgcgagttacgaagcg
ttcctacagatgaacgtctcgccggatagccgtcagcaggcgggtttgcaggaagttttc
cgctcggtctttccgatcaacgattttgccgggcgtggtcgcctggagttcgtgtcctac
gaactcgaagagccgaaatacgatgtcgaggaatgcatccagcgcggtctgacattcgcc
gcgccgctgaaggtgatcctgcgcctgatcgtctgggatgtggacgaggatacggggtcg
cgctcgatccgcgacatcaaggagcagcctgtctacatgggcgacatgccgctcatgacc
gacaatggcacgttcatcatcaatggcaccgagcgcgtcatcgtcagccagatgcatcgc
agccccggcgtgttcttcgatcacgacaagggcaagacgcattcttccggcaaatatctc
tttgccgcgcgtgtcattccctatcgcggttcgtggctcgacttcgagttcgacgccaag
gacctgatttacgtgcgtatcgatcgcaagcgtaagctgccggtcacgactctgctttac
gcccttgagggcgagaattcgattgctgctcgtgctgcgaaggcggaagagggtggcgat
gtcgatgcgatgccgatccgcggcatggatcaggatgaaatcctcggctacttctacaat
gaagtgcctttcacgcggatgccgaagggttgggcgcgcccgttcgatcctgaggcgttc
cgtggcctgaagctgcttgagcccttgtacgatgccgataccggtgaggtcgtcgcggaa
gccgatgccaagctgacggcgcgcgccgtgcgcaagattgccgagaacacgcgggtcgtg
ctcgtcggtcgtgccgatcttctgggccggttcgtggcgcatgacctcgtcaacgagcat
accggcgaaatctacgccgaggccggcgaggaactgacggaagcacgtctggccgcgctg
gaagatgccggtgtcaccgaactgccgatgctgtccgtcgatggtcagcatggtccgtgg
attcgcaatacgctcgccgtcgacaagaacatgtcccgcgacgacgcgcttgtggacatc
taccgcatcatgcgcccgggcgagccgccgaccccggagacggcggaagcgatgttccgt
ggtctgttcttcgatccggaccgctacgacctttcggctgtcggtcgggtgaagatgaac
atgcgtctggaagtcgatgcgccggacacgctgcgtgtcctgcgcaaggaggacatcctg
cgcacggtcaagatcatgtgcgaactcaaggacggtcgcggccagatcgacgacatcgat
aacctcggtaaccgtcgtgtccgctcggtcggcgagctgatggaaaaccagtatcgtgtc
ggtctgctccgcatggagcgtgcgattcgtgagcgcatgggctcagtcgatatcgacacg
gtgatgccgcatgacctgattaacgccaagcctgcggcggcggcggtgcgcgagtttttc
ggctcgtcgcagctcagccagttcatggaccagaccaacccgctttccgaagtcacgcac
aagcgtcgtctttcggcgcttggcccgggcggtctgacgcgtgagcgtgccggcttcgag
gttcgtgacgttcatccgacgcattatggtcgtatctgcccgatcgaaacgccggaaggg
ccgaacatcggtctgatcaactcgctgtcgacctatgccaaggtgaacaagtacggcttc
atcgagacgccgtatcgcctggtcaaggacggcgtattgcaggatggctggaagtacctc
tccgcgatggaagaggacaagctgatcgttgcgcaggctgacgcgaagcagaacaaggaa
acgggcgaactgaccgacgagctggtgtcggtccgtcgttcaggcgacttccgccttgtg
ccgcctgagcaggtcacggcatgtgacgtttcgccgaagcagcttgtttccgtggccgcg
gcgttgattccgttccttgagaacgatgacgccaaccgcgcgctgatgggctcgaacatg
caacgtcaggccgtgccgctggtacgtgccgatgcgccgctggttggcaccggcatggaa
gcagccgtcgcgcacgactcgggcgcgacgatcgtcgccaagcgcaatggtgtcgtcgat
cagatcgatggcgcgcgtatcgtggtgcgggcgacggatgtcgcgggtgcaacgcagggc
gtcgatatatatcgtctgcgtaaatacatgcgttccaaccagagtacctgcatcaaccag
cgtccgctggtgcgcgtgggcgataccgtgcatgcgggcgatatcattgccgacggtccg
tccaccgagttgggcgaactggcgctgggccggaacgtgctggtcgcgttcatgccctgg
aacggttacaacttcgaagactcgatcctgatttccgagcggatcgcgcgtgatgacgtc
ttcacctcgatccatatcgaggagttcgaggtcatggcccgcgataccaagctgggccag
gaagagatcacgcgcgatattccgaatgtcggcgaagagtcgctgcgcaacctcgacgag
gcgggaatcgtctatgtcggcgcggaagtgaatccgggcgacattctggttggcaaggtg
acgccgaagggtgaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggt
gaaaaggcttccgacgttcgcgatacgtcgctgaagttgccgcccggcaccacgggcacg
atcgttgacgtgcgcgtcttctcccgccgtggcgtggacaaggacgagcgcgcgatggca
atcgagcgcgccgagatcgagcgtctcacgaaggatcgggacgatgagcgtgcgatccag
gagcgcagtttcctgaatcgtctgcgtgagcgtttgctcaatcagacggcgggtgcgggc
ttcaagggcatcaagtccggcacggtcatcacggaagacgtgctggcggagcatccgcgt
ggtgcatggcgcaacatcgtcgtgtccgatgacagcgtgatgtccgagatcgagacgctg
cgccgtgaattcgatgctgccgtcgggcgcatccaggcgcgtttcgacagcaaggtcgag
aagctgcagcgtggcgacgaactgccgccgggcgtcatgaagatggtcaaggtgttcgtg
gcggtgaagcgtaagctgcagccgggcgacaagatggccggtcgtcatggtaacaagggt
gtcgtctcgcgcgtcgtgccggtcgaggacatgccgttccttgaggatggcacagccgtg
gatctggttctgaacccgctgggcgtgccgtcgcgcatgaacgtcggtcagattctcgag
acgcatctgggctgggcctgtgccaatctcgggcaggatatcggtcgactggcggacgat
tatcagcgcacgggcgagaagaagcaggaactgctggatcgtctgaaggatgtctatggt
gacgacatctacaccagcgatattgcgaccctgccgaacgagcagttgatggagctggcc
ggtaacctgcgcaagggcgtgccgatcgcgacgccggtgttcgatggtgcgtcgatcccg
gatatcgaggacatgctggccaaggccggcgtggacaagtccgggcagtcgcagttgatc
gacggtcgtacgggtgagccgttcgagcgcaagacgaccgttggctatatctacatgctc
aagctgcatcatctcgtggacgacaagatccacgctcgttcgatcggtccgtattcgttg
gtcacgcagcagccgctgggtggtaaggcgcagttcggtggtcagcgcttcggcgagatg
gaagtgtgggcgctggaggcttacggtgcggcgtatacgctgcaggaaatgctgacggtg
aagtcggacgacgtatccggccgcaccaaggtctatgaggccatcgtgcgtgagcatgac
gatttcgaggccggcattccggagagcttcaacgtgctcatcaaggaactgaagtctctc
ggcctgaacgtcgatcttgagcagagcggctcgtaa
DBGET
integrated database retrieval system
