Neobacillus cucumis: QNK12_21160
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Entry
QNK12_21160 CDS
T09078
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ncm
Neobacillus cucumis
Pathway
ncm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QNK12_21160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_21160
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
QNK12_21160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
DUF6058
Motif
Other DBs
NCBI-ProteinID:
WHY90169
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All DBs
Position
complement(4240808..4241662)
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AA seq
284 aa
AA seq
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MHTMWKGSISFGLVNIPIKLHTATEDKDIKLRTLHNKCHAPIRYEKICSVCEEEVKPEDI
VKAYEYTKGKFVVLDNDDLEKLRKENEDKAVEIIDFVKMEQIDPIYFDRSYYMSPNEGGG
KAYSLLRKALQETGKVGLAKIVIRSKEQMAVIRVYENTLVMETIHYPDEVRNAGDVPSVP
SEDKVTKKELDTAIMLIDQLTTDFTPEKYTDEYRTALLELIESKRMEKETVVTPAAKEAP
SNVTDLMAALQASIDRTKPEKAVAPKKKAASPKKKTVSRVKKEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaagggaagtatcagctttgggctcgtgaatattcccatcaagctt
catacggcaacagaagataaggatatcaagcttcggacccttcataataagtgtcatgct
ccaatcaggtatgaaaaaatctgttcggtttgcgaagaagaggtcaaacctgaggatatt
gtcaaagcttatgaatacacaaagggaaaatttgtcgtcctggacaatgatgaccttgaa
aagttacgaaaagaaaacgaagataaagcggttgaaattattgattttgtcaaaatggaa
caaattgatcctatttattttgatcgcagttattatatgtcaccaaatgaaggaggagga
aaagcttactcgttattacgtaaagcccttcaagaaaccggaaaggttggactggctaaa
atcgtgattcgctcaaaggaacaaatggccgtgataagggtgtatgagaatacattggta
atggaaaccattcactatcctgatgaggtccgaaatgcaggagatgttcccagcgttcct
tcggaggataaagtgacgaaaaaagaactggacaccgccatcatgctcattgaccaatta
acaaccgattttaccccggaaaaatatacggatgaataccgaacagccttattagaatta
attgagtccaaacgaatggaaaaagaaacggtggtgacgcctgctgccaaagaagctcca
tctaacgttaccgatttaatggcagccttgcaggcatcgattgatcgcactaaaccggaa
aaagccgtggccccaaagaaaaaagctgcctccccaaagaaaaagaccgtttcaagagtg
aaaaaagaagcataa
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