Neobacillus cucumis: QNK12_24615
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Entry
QNK12_24615 CDS
T09078
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ncm
Neobacillus cucumis
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncm03016
]
QNK12_24615 (thpR)
Enzymes [BR:
ncm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QNK12_24615 (thpR)
Transfer RNA biogenesis [BR:
ncm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QNK12_24615 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WHY90820
LinkDB
All DBs
Position
complement(4901975..4902544)
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AA seq
189 aa
AA seq
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MNHQTHFFYAVPIPKEIKLIMKDHCEKLQQSLPFNRWVHHEDLHITLAFLGFAPSDQLEK
SLENVRTELKGNPSFSLQINQLGIFGRKESPRIFWADTLKSDELQFVRKKVFTACEDAGF
QLETRPFRPHITLARKWTGDEPFHHERLDVWQELQPNPLAFLASEVVLFQTHLEKTPKYE
VKKVFSLKK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatcaaactcattttttttacgctgttccaattccaaaagaaataaaattaatc
atgaaagaccattgtgaaaaattacaacagtcccttccttttaaccgctgggtccatcat
gaagatttgcatattaccttagcctttttaggatttgcaccttcagatcaacttgaaaaa
tcattagaaaacgtcagaacagaactaaagggaaacccttctttttcactgcagattaac
caacttggaatttttggacgtaaagaatctccccgtatcttttgggcggatacgttaaaa
agtgatgaacttcaattcgttagaaaaaaagtatttacagcatgtgaagatgcaggtttt
caacttgaaacaagaccgtttcgtccccatatcactcttgcaaggaaatggacaggggat
gaaccctttcatcatgaaagacttgatgtttggcaggaactacagccgaacccccttgca
tttttagcgagtgaagtggttttatttcaaacccatttagagaaaacaccaaaatatgaa
gtgaagaaagtattctctctaaaaaaataa
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