Neurospora crassa: NCU04799
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Entry
NCU04799 CDS
T01034
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
ncr
Neurospora crassa
Pathway
ncr03015
mRNA surveillance pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCU04799
09123 Folding, sorting and degradation
03018 RNA degradation
NCU04799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU04799
03041 Spliceosome [BR:
ncr03041
]
NCU04799
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCU04799
mRNA cycle factors
Stress granule specific factors
NCU04799
Spliceosome [BR:
ncr03041
]
Complex C
Other components
Complex C specific factors
NCU04799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
YflT
FAM192A_Fyv6_N
Motif
Other DBs
NCBI-GeneID:
3876563
NCBI-ProteinID:
XP_960425
UniProt:
Q7S6N6
LinkDB
All DBs
Position
VI:complement(862886..866709)
Genome browser
AA seq
764 aa
AA seq
DB search
MAATSTAAVDQLAADLGNTSLDNKAAAPAPIDTSAVPEAQAEGAEAAPTPTAAPHPQASA
SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE
LNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVA
QDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANF
TNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAVDE
LNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKL
RAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGDRK
LGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQARNQL
RMQQAAAQAGMPQQYMQAPVYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQGGRPGQYPYQ
QGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQVGALGGGRGGPAGRGPQGIP
AGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPGAPADLSAGSFL
QAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNALNV
KVQEALAVYDEYLKTQGQQPTQQPAEANGEQPKAEEQKPEEQKA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacttctaccgccgctgtcgaccagctcgccgctgacctcggcaacaccagc
ctcgacaacaaggccgctgccccggcccccatcgacaccagcgctgtccccgaggcccag
gccgagggtgctgaggctgctcctacccccactgctgcccctcacccccaggcttccgcc
tctctctatgtcggcgagcttgacccctccgtcaccgaggccatgctcttcgagctcttc
tcccagatcggctctgtcgcctccattcgtgtctgccgcgatgctgtcacccgtcgctcc
ctcggctatgcctacgtcaactacaacaccaccgctgacggcgagaaggctcttgaggag
ctcaactacaccctgatcaagggccgcccttgccgcatcatgtggtcccagcgtgacccc
gccctccgcaagaccggtgccggcaacatcttcatcaagaacctcgacgctgccattgat
aacaaggctcttcacgacacctttgctgctttcggcaacatcctttcctgcaaggttgcc
caggatgagcacggtaactccaagggctacggtttcgtccactacgagaccgatgaggct
gcctcccaggccatcaagcacgtcaacggcatgcttttgaacgagaagaaggtctacgtt
ggccaccacattcccaagaaggaccgccagagcaagttcgaggagatgaaggccaacttc
accaacgtttatgtcaagaacattaacaacgaggtcaccgacgaggagttccgtgagctc
ttcgccaagttcggtgaggtcacttcttcctcccttgcccgtgaccaggagggcaagtcc
cgtggcttcggtttcgtcaacttcaccacccacgaggctgctgcccaggctgttgatgag
ctcaacggcaaggacttccgtggccaggacctctacgtcggccgtgcccagaagaagcac
gagcgcgaggaggagctccgcaagtcctacgaggctgcccgcctcgagaaggccaacaag
taccagggtgtcaacctgtacatcaagaacctcggcgatgatgtcgatgacgacaagctc
cgtgccatgttctctgagtatggccccatcacctccgccaaggtcatgcgcgattctctg
atcgagggctccgaggagaaggatgagaaggacaaggagaacaagaaggagggtgagacc
aaggaggaggagcagaatgagggctctgagaagaagactgagaagaagggtgaccgcaag
ctcggcaagagcaagggcttcggcttcgtttgctttagcaaccccgatgatgccaccaag
gccgtcactgagatgaaccagcgcatggtcgatggcaagcccctctacgtcgctcttgcc
cagcgcaaggatgtccgcaagagccagcttgaggccagcatccaggctcgcaaccagctc
cgcatgcagcaggccgctgcccaggctggtatgccccagcagtacatgcaggctcctgtc
tactacgctggtcagcagcctggtttcatgcccgcccccggcggtcgtggcgtccccttc
ccccagggtggtatcgtccccggcgttcagggtggtcgccctggccagtacccctaccag
cagggtggccgcggtggcgtccctccccagcagatgccccctatgggttaccccatcaac
cagttcggccctggtgctttccctcctaacacccctcagtacatggctgctatgggccag
gttggtgctcttggtggtggccgtggcggtcccgctggccggggtcctcagggcatcccc
gccggtattccccagggtctccagggcggccctgccgttcccggctacccccctgccggt
cgtccccagaacggtggcggtcgcggcactcctcgcggcaacgctaactttatggctgcc
ggccgtggtgcctcccccattcctggcgctcctgccgacctcagcgctggctctttcctc
caggctcagctcgctaccactcaggatcctcaggcccagaagcagatcattggcgagaac
ctcttccccaagatccaggccatccagcccgctcttgctggcaagatcaccggcatgctc
ctcgagatggacaacgctgagctgatcaacctgttcgaggatgacaacgctcttaacgtc
aaggtccaggaggctcttgccgtgtatgacgagtacctcaagactcagggccagcagccc
acccagcagcccgctgaggccaacggcgagcagcccaaggctgaggagcagaagccggag
gagcagaaggcttaa
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integrated database retrieval system
