Nonomuraea coxensis: Nocox_10515
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Entry
Nocox_10515 CDS
T07466
Symbol
kdgR1
Name
(GenBank) Pectin degradation repressor protein KdgR
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ncx
Nonomuraea coxensis
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncx03000
]
Nocox_10515 (kdgR1)
Transcription factors [BR:
ncx03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Nocox_10515 (kdgR1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
TrmB
HTH_24
HTH_PafC
Rrf2
HTH_5
MarR
HTH_27
DUF742
Penicillinase_R
HTH_AsnC-type
HTH_23
GAF_2
DprA_WH
Dimerisation
HTH_45
GAF
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
QYC39722
LinkDB
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Position
complement(2185349..2186092)
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AA seq
247 aa
AA seq
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MSVQSVERALDVLEALAEHGGEAGLSEIAARTGLPYGTIHRLLQTLLARGYVRQEADRRY
ALGGGLVRLGGVAEGMVGVRAQPYLEKMVELSGETANLAVLEGDFIVYVAQASSPRRLRM
FAEVGRRVLPHSTAVGKVLLAGRPPAEAVAVFERTGMPRRTPNTITEIDAMLAELAAVRE
RGYAMDLGEEELGVHCMAVPVRDGARVVAAMSVSGPAERIDALDRTELAEGLGKIALDFG
REFGPHS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtccagtcggtggagcgggcgctcgacgtgctggaggcgctggccgagcacggg
ggcgaggcggggctgtcggagatcgcggcgcggacggggctgccgtacggcacgatccac
cggctgctgcagaccctgctcgcccgcggctacgtacgccaggaggccgaccgtcgctac
gcgctcgggggcgggctggtgcggctcggcggggtcgcggagggcatggtgggggtgcgg
gcgcagccgtacctggagaagatggtggagctgtccggcgagacggcgaacctggccgtg
ctcgaaggcgacttcatcgtctacgtggcgcaggcgtcctcgccgcgcaggctgcggatg
ttcgccgaggtggggcggcgggtgctgccgcacagcacggccgtgggcaaggtgctgctg
gcggggcggccgccggcggaggcggtcgcggtgttcgagcgcaccggcatgccccgccgc
acccccaacaccatcaccgagatcgacgccatgctcgccgagctggccgcggtgcgggag
cgcggctacgccatggacctcggcgaggaggagctgggcgtgcactgcatggcggtgccc
gtgcgcgacggggctcgggtggtggcggcgatgtcggtgtcggggccggccgagcggatc
gacgcgctggaccggaccgagctggccgaggggctggggaagatcgctctcgacttcggc
agggagttcggcccgcactcctag
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