Nonomuraea coxensis: Nocox_42420
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Entry
Nocox_42420 CDS
T07466
Symbol
sigM3
Name
(GenBank) ECF RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ncx
Nonomuraea coxensis
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncx03021
]
Nocox_42420 (sigM3)
Transcription machinery [BR:
ncx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nocox_42420 (sigM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_16
TPR_14
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QYC46021
LinkDB
All DBs
Position
9057685..9058320
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AA seq
211 aa
AA seq
DB search
MNSPPETPSPADRPAVTDADLLTAHINGDPHAFSEIVKRHRDRMWAVALRTLGDPDEAAD
AVQDAFVSAYRKAATFRGEAAVTTWLHRIVVNACLDRMRRKSVRPVADDELIEAAERETP
LPDQTVEREVSMEVSAALKLLPADQRAALVLVDMMGYSVEDAAQVLEVPSGTVKSRCARG
RAKLAPILSHLRNRSDLNRVSSAKGAELRDG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaactccccacccgagacaccttcaccagcggatcggccggcggtcacggacgccgac
ctgctgaccgcgcacatcaacggggatcctcacgccttcagcgaaatcgtcaaacggcac
cgcgaccgcatgtgggcggtcgccctgcgcacgctcggtgacccggacgaggccgccgac
gccgtgcaggacgccttcgtctccgcctatcgcaaggccgccacgttccgcggcgaggcc
gccgtcaccacctggctgcaccgcatcgtggtcaacgcctgtctcgaccgcatgcggcgc
aagtccgtccggccggtggccgacgacgagctcatcgaggccgccgagcgcgagacgccg
ctgcccgaccagaccgtggagcgcgaggtctccatggaggtttcggccgctctgaaactg
ctgcccgccgaccagcgcgcggccctggtgctcgtcgacatgatgggctattcggtcgaa
gacgcagctcaggtgctggaggtgcccagcggcaccgtgaagagccgctgcgcccgagga
cgcgcgaaacttgccccaattctttcgcatctgcggaaccgatcagacctcaatcgcgtc
tcatccgcgaagggagcagaacttcgtgacgggtga
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