KEGG   Nocardia cyriacigeorgica: NOCYR_0694Help
Entry
NOCYR_0694        CDS       T01756                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ncy  Nocardia cyriacigeorgica
Pathway
ncy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ncy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    NOCYR_0694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncy03400]
    NOCYR_0694
Enzymes [BR:ncy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NOCYR_0694
DNA repair and recombination proteins [BR:ncy03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     NOCYR_0694
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: CCF61508
UniProt: H6QYV3
LinkDB All DBs
Position
743512..745872
Genome map
AA seq 786 aa AA seqDB search
MNAGSRRRATDNGSRRSFRDAAGEPVIRIELSNLDKVLYPATGTTKGEVIAYYTAIAPAM
LPHVAGRPVTRKRWPNGVEESSFFEKNLAEHAPDWLPRRAMRHSDRTVTYPLIDSEAGLA
WIGQQASLEVHVPQWRFDGEHMGPATRLVFDLDPGPGAGLAECATVALEVRDMVDRIGLR
AFPVTSGSKGIHLYVPLDRVLSPGGASTVAKQVATNLEKMHPELVTATMAKKVRTGKVFL
DWSQNNPAKTTIAPYSMRGRAQPNVAAPRSWAEIEDRESLRHLRFDEVLARFQADGDLLA
GLDPPISQAGASRPDPLSVYRSMRDPARTPEPVPAHPPTPGPGNRYVVQEHHARRLHWDV
RLERDGVLVSWAVPKGPPTDTKENRLAVHTEDHPLEYLDFHGSIPKGEYGAGTMTIWDSG
TYETEKWRDDEVIVVMRGERLHGRYALIRTGGKNWLMHLMKEQPAEGDGAAPSGNGRRAA
KESAEVPERSGGADLPRGLAPMLATTGEVAELDPKEWAFETKWDGYRLILEFDHGTPTLR
SRAGNIVTDRYPKIAALAEELAGHRVVLDGEAVVFDDNGVANLALLQADTRRAELVAFDL
LYLDGTSLIRKRYSDRRRVLEALAATTSALSVPPQLEGTGEDALNASLEVGAEGVVAKRK
DSVYLPGKRGHSWVKQRNWQTQQVLVGGYRGSAARPFASLLVGIPDNGKLIYVGRVGTGF
SEDEMRALATRLQRRRRKTSPFVNEMSREETKDATWVTPEISGTVRFMNWTDSGRLWHPA
WLGRAD
NT seq 2361 nt NT seq  +upstreamnt  +downstreamnt
atgaacgccggttcccgccgccgggccacggacaacgggtcgcgccgcagcttccgcgat
gcggcgggcgaacccgtcattcggatcgaactgagcaacctcgacaaggtgctctacccg
gcgaccgggaccaccaaaggcgaggtcatcgcctattacaccgcgattgcccccgccatg
ctgccgcatgtggccggccgcccggtcacccggaaacgctggcccaatggcgtcgaggaa
tcctccttcttcgagaagaacctcgccgaacatgcacccgactggctgccccggcgggcg
atgcgccattccgaccgcaccgtcacctatccgctgatcgattccgaagccggcctggcc
tggatcggccagcaggcctcgctggaagtgcatgtgccgcaatggcgtttcgacggcgag
cacatgggcccggccacccggctggtcttcgatctcgatccgggccccggcgccgggctg
gccgaatgcgccacggtggcgctcgaggtgcgcgatatggtcgaccggatcgggttgcgc
gcgttcccggtcaccagtggtagcaagggaattcacctgtatgtgccgctggaccgggtg
ctgagcccgggcggtgcgtccaccgtcgccaagcaggtcgccaccaatctggagaaaatg
catcccgaactcgtcacggcgacgatggcgaagaaggtgcgcaccggaaaggtcttcctg
gactggagtcagaacaatccggccaagaccaccatcgcgccgtactcgatgcgcgggcgc
gcgcagcccaacgttgccgcgccgcgcagctgggcggagatcgaggaccgggaatcgttg
cggcacctacgcttcgacgaggtgctggcccgtttccaagccgacggtgatctgttggcg
gggctcgatccgccgatctcgcaggccggtgcctcccggccggacccgctgagcgtctac
cggtccatgcgcgaccccgcgcgcacgccggaacccgtgcccgcgcacccgccgacgccc
gggcccggcaaccgctacgtcgtccaggagcatcacgcccgccgcctgcactgggatgtg
cggctggaacgcgacggcgtgctggtgtcgtgggccgtgccgaagggcccacccaccgac
accaaggagaaccgcctcgccgtgcacaccgaggaccatccgctggagtacctcgatttc
cacggctccattccgaagggtgagtacggcgccggaaccatgacgatctgggactcgggc
acctacgagaccgagaagtggcgcgacgacgaagtgatcgtggtgatgcgcggcgaacgg
ttgcacggccgatacgcgctgatccgcaccggcggcaagaactggctgatgcacctcatg
aaggagcagccggccgaaggtgacggggccgcgccgtctggcaatggacggcgagcggcg
aaagagtccgccgaagtgcccgagcgatctggtggtgcggacctaccccgcgggctcgcg
ccgatgctcgccaccacgggcgaggtcgccgaactggatccgaaggaatgggccttcgaa
accaaatgggacggctaccggctcatcctcgaattcgaccacggcacacccacattgcgc
agccgggcgggcaatatcgtcaccgaccgatacccgaagatcgccgccttggccgaggaa
ttggccgggcatcgtgtagtgctcgacggtgaagcggtcgtgttcgacgacaacggtgtc
gccaatctggctctgctgcaggccgatacccgccgcgccgaactcgtcgccttcgatctg
ctctacctcgacggcacctcgctgatccgcaaacgctacagcgaccggcgccgggtgctc
gaggcgctcgccgccacgacatcagcgctgtcggtcccgccacagctcgagggcaccggc
gaagacgcgctcaacgccagcctcgaggtgggtgccgaaggtgtcgtcgccaagcgcaag
gactcggtctacctgccgggcaaacgcggccactcctgggtcaaacagcgcaactggcaa
acccagcaggtgctcgtcggcggctaccggggcagcgcggcgcgaccgttcgcctctttg
ctggtcgggatccccgacaacgggaaactcatctacgtcggccgagtcggcaccggattc
agcgaggacgagatgcgcgcgctcgccacacggctgcagcgccgccgccgcaagaccagc
ccgttcgtcaacgagatgtcgcgcgaggaaaccaaggacgcgacctgggtgacaccggag
atatcgggcacggtccgattcatgaactggaccgacagcgggcggctgtggcatccggcc
tggttggggcgggccgactga

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