Nocardiopsis dassonvillei: Ndas_0436
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Entry
Ndas_0436 CDS
T01248
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03030
DNA replication
nda03430
Mismatch repair
nda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ndas_0436
03430 Mismatch repair
Ndas_0436
03440 Homologous recombination
Ndas_0436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nda03032
]
Ndas_0436
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_0436
Enzymes [BR:
nda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ndas_0436
DNA replication proteins [BR:
nda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ndas_0436
DNA repair and recombination proteins [BR:
nda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ndas_0436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADH65883
UniProt:
D7AWB7
LinkDB
All DBs
Position
1:529302..530321
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AA seq
339 aa
AA seq
DB search
MGTLRMGALTRRRVGMRAADLEYAVLDMETTGLEPREGARIVEIAVVRVRGDGKFVEEFS
TLIDPRAPVGGREFHGIGEGDTVGAPTAAQVVPRLTELLSGAVVVGHNLDFEQRFLASEL
VPAGLPTGQAGLCTLRALRSQVELERYSLPKASHRLSGDWPTGQHTALGDARACAKLLAE
MLTNAPGELRYGGPAPKRLTVPDPVPGPVGAAGPVRWKPRTSSVPGGLPPLSPWQARWRP
HELDPLLCGGAFGATDRAIAEMAAHRDTRFRERLAAAAAVTGGLAATAAGGLLLRMAGGG
GTRDLGYPAGRGDGSPERLLGRIGRSVLRDRPGFTDRTG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgctgcggatgggcgcgctgacccggcgcagggtcggcatgcgggcggcggac
ctggagtacgcggtgctcgacatggagaccaccggcctcgaaccgcgcgagggcgcgcgc
atcgtggagatcgccgtggtgcgcgtgcgcggcgacggcaagttcgtggaggagttcagc
actctgatcgacccgcgcgcgccggtgggcggccgggagttccacggcatcggcgagggc
gacacggtgggcgccccgaccgcggcccaggtggtgcccagactcaccgaactgctctcc
ggggcggtcgtggtcggccacaacctcgacttcgaacagcgcttcctggcctcggaactg
gtgcccgccgggcttcccacgggccaggccgggctgtgcacgctgcgcgcgctgcgctcc
caggtggagctggagcggtactcgctgcccaaggcctcccaccggctcagcggcgactgg
ccgaccggacagcacaccgcgctgggagacgcccgtgcctgcgccaagctgctcgcggag
atgctcaccaacgcccccggcgaactgcgctacggcggtcccgcgcccaagcggctcacg
gtgccggacccggttcccggcccggtcggcgctgcggggcccgtccgctggaagccgcgc
acgtcctcggtgcccggcggactgcccccgttgagcccctggcaggcgcggtggcggccc
cacgagctggacccgctgctgtgcggcggggccttcggcgccacggaccgcgccatcgcg
gagatggccgcgcaccgggacacccgcttccgcgagcggctggccgcggccgccgcggtg
acgggcgggctcgcggccaccgccgcgggcggcctgctgctgcgcatggccggcggcggg
ggcacgcgcgacctcggttacccggccggacgcggcgacggctccccggaacggctgctc
ggccggatcggccggtccgtgctcagggaccggccggggttcacagaccggacagggtga
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