KEGG   Nitrospira defluvii: NIDE4271
Entry
NIDE4271          CDS       T01281                                 
Name
(GenBank) Sigma-54 dependent response regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
nde  Nitrospira defluvii
Pathway
nde02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nde00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NIDE4271
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nde02022]
    NIDE4271
Two-component system [BR:nde02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   NIDE4271
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA AAA_16 HTH_50 TIP49 MCM AAA_30 AAA_7 AAA_2 AAA_22 DUF815
Other DBs
NCBI-ProteinID: CBK43934
UniProt: D8P8V2
LinkDB
Position
complement(4205972..4207330)
AA seq 452 aa
MTQGAHILVVDDEVNIRGALVTLLEKKGHRVRGAGTGEEALEELEAAPADLVMTDLKMPG
IGGMEFLRRLKAKWPETEVVVMTAYGSIDTAVEAMRCGAYDYLTKPIDRERFPIVVEKAL
DRHALATENKQLKSRLDTRTRFDQMVGDSEPMRRVYNMVEMVAESDVTVLLTGESGTGKE
LVARAIHHRSARANGPFITLNCGALPENLFESELFGYDKGAFTGAMATKLGRFELAHEGT
LLLDEVGELSLKSQVDFLRVLETKEFRRLGGTKVIKVDTRIIAATNRNLEAAVKQGDFRE
DLYYRLNVVPIHLPPLRERAEDIPLLVNRFLIAFSTQYRREPKEVSRDAMRLLRLYAWPG
NIRQLRNLMERLVVTVKDAMIQPEHLPEEIQASKEDARTMLVTLGTPLEQIERDVIQRTL
AEVTNHREKAAKLLGISLRALQYKIKEYGIRA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgacgcaaggggcacatattctcgtcgtagacgacgaggtcaatattcgtggcgcgtta
gtgacgcttcttgaaaaaaaaggtcaccgcgtgcgcggggccgggacaggagaagaagcg
ctggaagagcttgaggccgccccggccgatctggtgatgaccgacctcaagatgcccggg
atcggcggcatggagtttcttcgtcgcctgaaggccaagtggccggagacggaagtcgtg
gtcatgacggcgtatggctcgatagatacggcagtagaggccatgcgatgtggcgcatac
gattacctcacgaaacccatcgatcgcgagcggtttcccatcgtggtcgagaaggcgctg
gatcgccatgcgctggcgacggagaacaagcagctcaagagccgcctggacacacgcaca
cgcttcgatcagatggtcggtgacagcgagccgatgcggcgcgtttacaacatggttgag
atggtggccgagagcgatgtcacggtgttactgacgggggaaagcgggaccggaaaggaa
cttgtcgcccgggcgatccatcataggagtgcccgggcgaacggaccgtttatcacgctg
aactgcggcgcgttaccagagaacctgtttgaaagtgaactgttcggctacgacaaaggg
gcgtttaccggagcgatggccacgaagctggggcgattcgaactcgcccatgagggaacg
ctgcttctggatgaagtcggcgagctctctttaaaatcgcaggtggatttccttcgtgtc
ttagagacgaaggaattcagacgcctgggcggaaccaaggtgatcaaggttgataccagg
atcattgccgccacgaatcgcaatctcgaagcagccgtcaagcagggtgactttcgcgaa
gacctctactatcgattgaatgtcgtcccgatccacctgccgcccctgcgcgagcgtgcc
gaagatatcccgctgctcgtgaaccggtttctgatcgccttctcgacccagtatcgccgc
gagccaaaggaggtgtcacgcgacgccatgcggttgctccgcctctatgcctggcccggg
aatattcgccagctccgaaatctcatggagcggctggtggtcacggtgaaagatgccatg
attcagcccgaacacttgccggaggaaatccaggccagcaaggaggatgcccgcacgatg
ctcgtgacgctggggacgcccctggaacagatcgaacgggatgtcatccaacggacattg
gccgaagtgacgaatcatcgagagaaagcggccaaactcctcggcatcagcctccgtgcg
ttgcagtacaagatcaaagagtacggcatccgggcctaa

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