Nocardioides daphniae: E2C04_17400
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Entry
E2C04_17400 CDS
T05939
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ndp
Nocardioides daphniae
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndp03021
]
E2C04_17400 (sigM)
Transcription machinery [BR:
ndp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2C04_17400 (sigM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QCC78532
UniProt:
A0A4P7UE11
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All DBs
Position
3545664..3546362
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AA seq
232 aa
AA seq
DB search
MSAPGPTDAQLLADHVAGDHEAFGLLFARHRDRLWAVALRTAGNPDDAADALQDAMVSAF
RRAETFRGQSSVTTWLHRIVVNACLDRHRHLKVRAAQPLPDDVDRMPPATSPPGQDAPVD
PADAAVDSDRRQRVLAALATLPPEHRAALVLVDMEGYSVAEAATMLSCPEGTVKSRCSRA
RARLRVLLAADLGPPRGNPDAAAPVPSPESPPPPSGSPTVPPTPTSPGGGAP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcccggaccgaccgacgcgcagctcctcgccgaccacgtcgcaggtgaccac
gaggcgttcgggctgctcttcgcccgtcaccgcgaccggctgtgggcggtcgccctgcgc
accgccggcaacccggacgacgccgccgacgccctccaggacgccatggtctcggccttc
cgacgggccgagaccttccgtggccagtcgtcggtgaccacctggctgcaccggatcgtc
gtcaacgcctgcctcgaccggcaccgccacctcaaggtgcgcgccgcccagccgctgccc
gacgacgtcgaccggatgcccccggccaccagcccgccagggcaggacgcccccgtcgac
ccggcggacgcggccgtcgactccgaccgtcgccagcgggtgctggcggcgctggccacg
ctgccgccggagcaccgcgccgccctcgtcctggtcgacatggagggctactccgtcgcg
gaggccgccacgatgctgagctgccccgagggcacggtgaagtcccgctgctcacgggct
cgggccaggctccgggtgctgctggccgccgacctcggcccgccccgcgggaaccccgac
gccgccgcccccgtcccatccccggagagcccaccgcccccgtccggctcaccgaccgtc
ccgcccacaccgaccagccccggaggaggtgccccgtga
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