KEGG   Novosphingobium decolorationis: HT578_06620
Entry
HT578_06620       CDS       T07993                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
ndr  Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ndr03021]
    HT578_06620 (rpoH)
Transcription machinery [BR:ndr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HT578_06620 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 HTH_11
Other DBs
NCBI-ProteinID: QVM83407
LinkDB
Position
1475043..1475948
AA seq 301 aa
MSNTQRNLPAIPALGGEQSLNRYLAEIRKFPVLKPEQEYMLAQRYKEHEDSDAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKKNLDAYEDSDLRPDDVTKIATTLGVSETEVVNM
NRRMMMGGDASLNVSLREEGEGQWMDILQDDNPLQDEIVAEAEEKTVRHDMLVEAMDALN
ERERDILTERRLSEDPKTLEELSQVYNVSRERVRQIEVRAFEKLQKAMNRIATDKQLLPA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgagcaacacccaacgaaacctaccggcaatcccggccctgggcggggagcagagtctc
aaccgctacctcgccgagatccgcaagttcccggtgctcaagcccgagcaggaatacatg
ctcgcccagcgctacaaggaacatgaagattccgacgctgcggcccagctcgtcaccagt
cacctgcgcctcgtcgcgaagatcgcgatgggataccgcggctatggcctgcccgtctcc
gagcttatctccgaaggcaatatcggcctcatgcagggcgtgaagaagttcgaacccgat
cgcggtttccgacttgccacgtatgccatgtggtggatcaaggcctcgattcaagagtac
atcctgcgttcgtggagcctcgtgaagatgggcaccaccgccgcgcagaagaagctgttc
ttcaacctgcgccggatgaagaagaatctcgacgcctacgaagattcggacctgcgcccc
gacgacgtgaccaagatcgcgacgacgctgggcgtgtccgagactgaggtcgtcaacatg
aaccgccgcatgatgatggggggcgatgcgtcgctcaacgtctccttgcgtgaggaaggc
gaagggcagtggatggacatcctgcaggatgacaatccgctgcaggatgaaatcgtcgcc
gaggccgaggaaaagaccgtgcgccacgacatgctggtcgaggcgatggacgcgctcaac
gagcgtgaacgcgatatcctcaccgagcgccgcctgtcggaagatcccaagacccttgag
gaactgagccaggtctacaacgtcagccgcgagcgcgtgcgccagatcgaggtgcgcgcc
tttgaaaagctgcaaaaggcgatgaaccgcatcgccacggacaagcagctcctgcccgcg
gcctga

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