KEGG   Novosphingobium decolorationis: HT578_16310
Entry
HT578_16310       CDS       T07993                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
ndr  Novosphingobium decolorationis
Pathway
ndr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HT578_16310
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ndr02044]
    HT578_16310
Secretion system [BR:ndr02044]
 Type IV secretion system
  Trb secretion system protein
   HT578_16310
SSDB
Motif
Pfam: VirB8 PTR2
Other DBs
NCBI-ProteinID: QVM85047
LinkDB
Position
complement(3534391..3535074)
AA seq 227 aa
MFRRPSTHYGKAPEPETPYQRAAQVWDDRIGSARVQARNWRYMAFGSLLLSAGFAAALVW
QSARGTVVPWVVQTDRLGQAQAIAPATVDYQPTDPQIAFHLARFIEQVRSIPADAIIVRQ
NWLRAYDFTTDRGAAALNDYARSNDPFTKVGRQQIAVDVSSVIRASPDSFRVAWTERRYE
NGQLADTTRWTAILTIVVQIPRNADRLRANPLGIYVNAISWSRELGQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtttcgacgaccctcgacgcactatggaaaagctcccgaacccgaaacgccgtaccag
cgcgccgcccaggtttgggacgaccgtatcggctcagcccgcgtccaggcacgcaactgg
cgctacatggcgttcggctcgctcctcctgtcggcagggttcgcggcggcgctagtctgg
cagtcggcgcgcggcaccgtggttccgtgggtcgtccagacggaccggctcggccaggcg
caggcgatcgcgccggcgacggtagactatcagccgaccgacccgcagatcgcgttccac
ctcgcgcgcttcatcgagcaggtccgctcgataccggccgacgcgatcatcgtccgccag
aactggctgcgcgcctacgacttcacgacggaccggggagccgccgcgctcaacgactat
gcgcgctccaacgatcccttcacgaaggttggccgccagcagatcgccgtcgacgtctcg
agcgtgatccgcgcctctcccgacagcttccgggtcgcctggaccgagcgccgctacgag
aacggccagctcgccgacacgacccgatggacggcgatcctcaccatcgtcgtccagatt
ccgcgcaacgccgaccggctgcgcgccaatccgctggggatctacgtcaacgcaatttca
tggtcacgggagctggggcaatga

DBGET integrated database retrieval system