Neorickettsia findlayensis: GP480_02410
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Entry
GP480_02410 CDS
T06378
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nef
Neorickettsia findlayensis
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nef03032
]
GP480_02410 (topA)
03400 DNA repair and recombination proteins [BR:
nef03400
]
GP480_02410 (topA)
Enzymes [BR:
nef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GP480_02410 (topA)
DNA replication proteins [BR:
nef03032
]
Prokaryotic type
DNA Topoisomerases
GP480_02410 (topA)
DNA repair and recombination proteins [BR:
nef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GP480_02410 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
DUF1442
efThoc1
Motif
Other DBs
NCBI-ProteinID:
QHD65290
UniProt:
A0A6P1GAG9
LinkDB
All DBs
Position
complement(514585..517065)
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AA seq
826 aa
AA seq
DB search
MNVLIVESPTKGKAIAQYLGKDFRVLSSFGHVRALPNKKGSVNVTDSFEMVYKLTDTGET
VVPQLIKDVKNATALYLATDPDREGEAISWHLVEVFRENNVLPKDVHRVVFHEITKTAVQ
NAIASPRKIDENLVRAQRLRQALDYLVGFSISPVLWKKVPGSKSAGRVQSVALRILCDRE
NEIGLFTPEEYWTVIVNMIDGENLVIPAQLSHINGEKLERMSIRVVEEAEKIVEEIMGIP
FLVEEIKKKEFKQKPSPPFITSTMQQTASTVLGFSVKKTMSLAQKLYEGIEIGGAIEGLI
TYMRTDSTHLSVESVDAIREFIQKNFGQEYLPESPVLFKKKVKNAQEAHEAIRPTSIFRT
PEEIESYLTPDQYKLYRLIWERTLGCQMSDAIMSSQSITFVSQNEKFRTSASASLLVFDG
FNAAFSHGKNKNKNQDVIDFMNQQTKGAQVKVGDVLPMQNFTEPPHRYSEAGLVKHLEEL
GIGRPSTYATVVSVLQERGYASIVNKSFIPENRGRLVSEFLVHFFSKYVEYHFTAELEDR
LDKVADGTVFWLDVIRDFWDSFHSNVEEVEKIPITEVLAFVNGALAKQKLVSAEVKVGDK
CPKCEKGYMHLNVSRYGVFLGCTDYPVCRFIVNSYSNDDAEYPKQIAQDISLHKGPYGIY
LKYKGKNSSIPKDVDPVSIDEEFAHKIASLPKMLGKHPADGKEIKMGLGPYGLYLFWNAK
YYNLQFSQMDEMTLDKAVHFIESYVIHDKSLLRVLGSYEGEEIQIRDGRYGPYIKCGRMN
VPVPKGESPESLSLEAAIILIEKKKSTSKSTKKVTTKRKASAKGKK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcctcatagtagaatcacccactaaaggtaaggccattgcccaatatttaggt
aaagactttagggtactgtcgtcctttggtcacgtgcgagctcttcccaataaaaaggga
tctgtaaatgtaacggactcattcgagatggtctataagcttaccgataccggtgaaacg
gtggtgcctcagttaattaaggatgtaaaaaacgcgacagcactctaccttgccacggac
cctgatagagagggggaagcaatttcctggcatcttgtcgaagtgttcagagagaacaat
gtgcttcctaaagatgtacatagagttgtgttccacgaaattacgaaaaccgctgtgcaa
aatgctatcgcctctccgaggaaaatagatgaaaatcttgttcgtgcgcaaaggctaagg
caggcacttgactatcttgttgggtttagtatttctccggttttgtggaaaaaagtacct
ggaagtaaatctgccggtagagttcaatctgttgccctcaggatcttatgcgatagagaa
aatgagataggcctgtttacgccagaggaatattggacggtgattgtcaatatgatcgat
ggtgaaaatcttgtcattcctgcccaactttcacacataaatggtgaaaaactcgagaga
atgtccataagagtggtggaggaagctgaaaagattgttgaggaaattatgggaattcca
ttccttgttgaagaaatcaagaagaaggaattcaagcagaagcctagtccaccgtttatt
acatccactatgcaacaaacggcttcaactgtgcttgggtttagtgtaaagaaaacgatg
agtctagcacaaaagctgtatgagggtatcgagataggtggtgcaattgaagggctcatc
acctatatgaggacagattctactcatctttctgttgaaagtgttgatgcaataagagaa
tttattcagaaaaattttgggcaagagtatttgcctgagtctcctgttttattcaagaaa
aaagtgaaaaacgctcaggaagcgcatgaagctattcggccgacaagtatctttcgtacg
cccgaagaaattgagtcttatctcacaccagatcaatacaagctttacaggctcatatgg
gagagaacacttggctgtcaaatgagtgacgccattatgagtagtcagagcattacattt
gtttctcaaaacgagaagtttagaacttctgcgtcggcatcgctgcttgtttttgatggt
tttaatgctgcgttttcacatggaaagaacaaaaataaaaatcaggatgttatagatttc
atgaaccagcagacaaaaggtgctcaggtaaaggtaggtgatgtgttgcctatgcagaat
tttaccgagccgccgcatcgctactcagaagcagggttggtaaaacatctcgaggagctt
ggtatagggcgtccttcaacttacgctaccgtagtttctgttttacaggagagaggatat
gcttctattgtcaacaagtcgtttattccagagaacaggggaaggttagtttctgagttt
ttggtgcatttcttcagcaaatatgttgagtaccattttactgctgaactagaagataga
ctggacaaagtcgcagatggaacagttttttggctagatgtaattcgggatttctgggat
agctttcattctaatgtggaagaggtggaaaaaattccgattactgaggttttggcattt
gtaaacggtgcccttgcaaaacaaaagcttgtatcagcagaagtgaaggtgggtgataag
tgtccaaaatgtgaaaaagggtacatgcatttgaatgtaagtcgttatggagttttcctt
ggttgcacagattatccggtttgtagatttatagtgaacagttatagcaatgatgatgcc
gaatatcctaagcaaattgctcaggatatcagtctgcataaaggtccttacggtatctat
cttaaatacaagggcaaaaatagtagcataccaaaagatgttgaccccgtttctatagac
gaagaatttgctcataaaattgcttctttaccaaaaatgcttggtaaacacccggcagat
ggtaaagaaatcaaaatggggcttggcccgtatggtctatatcttttttggaatgcaaag
tattacaacttgcagttttcccaaatggatgaaatgacactagataaagccgtccatttc
atagagagttatgttattcatgacaagagtttactccgcgtgcttggatcctatgaaggt
gaagagatacagattcgtgatgggaggtacggtccgtatattaagtgtggtaggatgaat
gttccagtaccgaagggagaaagtccggagtcgttatctcttgaagcggcaatcattcta
attgagaaaaagaagagtacctctaaatctacgaagaaagtaacaacaaaaagaaaggcc
tccgcaaaagggaagaaatag
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