Oecophyllibacter saccharovorans: E3E11_05720
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Entry
E3E11_05720 CDS
T06092
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
neh
Oecophyllibacter saccharovorans
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neh03021
]
E3E11_05720 (rpoH)
Transcription machinery [BR:
neh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3E11_05720 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
KORA
UCR_14kD
Caudo_TAP
Motif
Other DBs
NCBI-ProteinID:
QDH15430
LinkDB
All DBs
Position
complement(1326847..1327743)
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AA seq
298 aa
AA seq
DB search
MNTSVALPAVGPENNLTRYLQEIRRFPLLTPDEELSLSRRWRDEHDLKAAHRLVTSHLRL
VAKIAMSYRGYGLPISELISEGNIGMMQAVRRFDPERGFRLATYAMWWIRAAMQEYILHS
WSLVKMGTTAAQKKLFFNLRRLKGQMQAFEEGDLQPEQVNQIATTLGVPEQDVVSMNRRL
AAPDHSLNAPLRLDGEGEWQDWLVDEQDTQEDVLAEAEEMSGRKALLAEALKTLNERERH
ILTERRLKEDPSTLEALSHHYGVSRERIRQIEARAMEKLQKAMAEDVSRHRQAQGLES
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttccgtcgcccttcccgcagtcggtccggaaaacaacctgacacgctacctg
caggaaatccgccgtttccccctcctgaccccagatgaggaactgtctctgtcgcgccgc
tggcgtgatgagcatgatctgaaggctgcccaccggctcgtaacctcccacctgcgtctc
gttgccaagatcgcgatgagctaccgcggctatggcctgccgatcagtgagctgatcagc
gagggcaatatcggcatgatgcaggcagtacgccgtttcgatcctgaacgcggtttccgc
ctcgccacatacgccatgtggtggatccgggccgccatgcaggaatacatcctccacagc
tggtcgctggtcaaaatgggcacgacggcagcgcagaaaaaactctttttcaacctgcgg
cgcctcaagggtcagatgcaggcttttgaagaaggggacctgcagcctgaacaggtcaac
cagatcgccaccacgctgggggtgccagagcaggacgtggtttcgatgaatcgccgcctg
gctgccccggaccacagcctcaacgccccgctgcgcctggacggcgaaggggagtggcag
gactggctggtggatgagcaggacacgcaggaagatgtcctggctgaagctgaagagatg
agcggccgcaaggccctgctggctgaggcgctgaagacgctcaatgaacgtgagcgccat
atcctgaccgagcgccgcctcaaggaggacccctccacgctggaagcgctgtcgcatcat
tatggcgtttcacgcgaacgcatccgccagatcgaggcgcgtgccatggagaaactgcag
aaagcgatggctgaagatgtgagccgtcaccggcaggcccagggcctggaaagctga
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