Oecophyllibacter saccharovorans: E3E11_06325
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Entry
E3E11_06325 CDS
T06092
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3E11_06325 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neh03400
]
E3E11_06325 (ruvB)
Enzymes [BR:
neh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E11_06325 (ruvB)
DNA repair and recombination proteins [BR:
neh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3E11_06325 (ruvB)
RecFOR pathway proteins
E3E11_06325 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_22
AAA_3
Mg_chelatase
nSTAND3
TsaE
AAA_18
AAA_14
NB-ARC
Rad17
AAA_2
NACHT
AAA_17
NTPase_1
AAA_33
RNA_helicase
DUF815
AAA_24
AAA_28
Bac_DnaA
Cytidylate_kin
bpMoxR
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QDH15525
LinkDB
All DBs
Position
1472253..1473377
Genome browser
AA seq
374 aa
AA seq
DB search
MAQQDHGQDQGHDDGWVDLPGSRPAAGGPARQAGAASRRETDGARQEEDAPEAALRPQSL
AEFTGQKASRENLAIFIEAARARGEALDHVLLHGPPGLGKTTLAQIVARELGVGFRATSG
PVIQRAGDLAAILTNLQPRDVLFIDEIHRLQPAIEEILYPAMEDFQLDLVIGEGPAARSV
RIDLAPFTLVAATTRAGLLATPLRDRFGIPLRLVFYTPDELRLIVLRGAGKLGMELTEEG
AGEIARRSRGTPRIAGRLLRRVRDFALVAGKGRIDRQTADAALSRLEVDAQGLDSMDRRY
LRRIAEHHHGGPVGVETLAAALAEARDTLEDVVEPYLIQEGFVLRTSRGRMLGERAWRYL
GLTPPASSTTPTLF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaggatcacggtcaggatcagggtcatgatgacggctgggtggacctgccg
ggcagccgtcctgccgcaggaggcccggcccgtcaggccggtgccgcttcccggcgggaa
accgatggcgcgcgccaggaggaggatgcgcctgaggcggccctgcgcccccagagcctg
gccgagttcaccgggcagaaagccagccgcgagaacctcgccatcttcatcgaggcggcg
cgcgcgcgcggcgaggcgctggaccacgtgctgctgcacggcccgcccgggctgggcaag
accacgctggcgcagatcgttgcgcgcgagctgggagtggggttccgcgcaacgtcaggc
cctgttatccagagggcgggcgatcttgcggccatcctgaccaacctgcagccccgcgac
gtgctgttcatcgatgagatccaccgcctgcagccggccattgaggagattctctacccc
gccatggaggatttccagctcgacctggtgatcggcgaggggccggctgcgcgcagcgtg
cggatcgacctggcccctttcactctcgttgcggccaccacgcgggccgggctgctggcg
acccccctgcgggaccgattcggcatcccgctgcgcctggtgttctacacacccgacgag
ttgcggctgatcgtgctgcgcggggcaggcaagctggggatggagctgaccgaagagggg
gcgggcgagatcgcgcggcgctcgcgcggcaccccgcgcattgcaggccgcctgctgcgg
cgcgtgcgtgacttcgccctggtggccggcaagggccggattgaccgccagacggctgat
gccgccctgtcgcgcctggaggtggacgcccagggcctcgacagcatggaccgccgctac
ctgcgccgcattgccgagcaccatcacggcggccctgtaggcgtggagacgctggctgcc
gccctggccgaggcgcgcgacacgctcgaggacgtggtggagccgtatctgatccaggaa
ggcttcgtgttgcgcacctcgcgcggacgcatgctgggcgagcgcgcctggcgttatctg
ggcctgaccccgcccgcttcctccacgacgcccaccctgttctga
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