Neorhizobium sp. SOG26: CYG48_10290
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Entry
CYG48_10290 CDS
T05626
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
neo
Neorhizobium sp. SOG26
Brite
KEGG Orthology (KO) [BR:
neo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neo03021
]
CYG48_10290 (rpoH)
Transcription machinery [BR:
neo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYG48_10290 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
GntR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AXV16046
UniProt:
A0A346YNJ9
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All DBs
Position
2067767..2068669
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AA seq
300 aa
AA seq
DB search
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGKIQAIEEGDLKPDQVSEIATKLNVSEEEVVSMNRRL
SGDASLNAPIRATEGESGQWQDWLVDDHDSQEEVLIEQDELETRRRMLSKALSVLNDRER
RIFEARRLAEDPITLEELSAEFDISRERVRQIEVRAFEKVQDAVQKEALAQANALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaatactttgccttccatcactgccggtgaagccggcctcaaccgctacctg
gatgaaattcgcaagttcccgatgcttgagccgcagcaggaatacatgctcgccaagcgt
tatgccgaacacggggatcgtgacgcggcccataagctcgtgacgagccacctgcggctc
gtcgccaagatcgccatgggttaccgcggctacggcctgccgatcggcgaagtcgtatcc
gaggggaatgttggcctcatgcaggccgtcaagaagtttgacccggaacgcggcttccgc
ctggcgacctatgccatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtctctcgtgaagatgggtacgactgccaaccagaagcggttgttcttcaacctgcgt
cggttgaagggcaagatccaggcgatcgaggaaggcgacctgaagcctgaccaggtttcc
gaaatcgccaccaagctcaacgtgtccgaagaggaagtggtttccatgaaccgccgcctg
tccggcgacgcctcgctcaatgccccgatccgggcaacggaaggcgagtcgggacagtgg
caggactggctggtcgatgaccacgacagccaggaagaagtcctgatcgaacaggacgag
ttggagacccgtcgccggatgctgtcgaaggcgctgagcgtgctcaatgatcgtgaacgt
cgcatcttcgaggctcgtcgcctcgcagaggatccgatcacgctcgaggaactgtcggcg
gagttcgacatcagccgcgagcgcgtgcgccagatcgaggtccgcgcctttgaaaaggtg
caggacgccgtgcagaaagaggcgctggcccaggccaacgcccttcgcgtcgttgacgcc
tga
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