Nocardiopsis exhalans: NE857_00900
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Entry
NE857_00900 CDS
T08285
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nex03021
]
NE857_00900 (sigM)
Transcription machinery [BR:
nex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NE857_00900 (sigM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
DUF134
Motif
Other DBs
NCBI-ProteinID:
USY20261
LinkDB
All DBs
Position
complement(195209..195835)
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AA seq
208 aa
AA seq
DB search
MDASQELPDKELLSRHAQGDEQAFAVLVRRHRERLWAVAIRMMGEPEEASDALQDAFLSA
FRAADRFRGDAQVTTWLHRIVVNACHDRLRRRKVRPATPTEDETLDVISNERLSRSGGGH
DHAAQTEARLDVHAALELLPLEQRMALTLVDMLGYRVDEAAEILEVASGTVKSRCARGRA
KLLPSLAHLRNPGPPRDVTSGRGGANPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtcccaggagcttcctgacaaggagctgttgtcaagacacgctcagggtgac
gagcaggcgttcgcggtactggttcgccgccaccgtgagcgcctgtgggctgtcgccatc
cggatgatgggcgagccggaggaagcttcggacgccctccaggacgcgttcctgtccgcg
ttccgcgcagccgaccgcttccggggcgacgcccaggtcacgacatggctgcatcgcatc
gtggtcaacgcctgccacgaccgcctcagacggcgcaaggtgcgcccggccaccccgacc
gaggacgagaccctcgacgtcatctccaacgaacgcctgagccgttcagggggcggccac
gaccacgcggcgcagaccgaggcccgcctggacgtgcacgccgccctggagctcctaccg
ttggaacagcgcatggcgttgaccctcgtggacatgctcggctaccgggtggacgaggcc
gccgaaatcctcgaggtcgcctcgggcacggtcaagagcagatgtgctcgaggtcgcgcc
aaacttcttccctcgctggcccatctaaggaaccctgggccgccccgagacgtcacatct
gggagaggaggtgccaacccatcgtga
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