Nocardiopsis exhalans: NE857_00925
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Entry
NE857_00925 CDS
T08285
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE857_00925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nex03019
]
NE857_00925
Enzymes [BR:
nex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NE857_00925
Messenger RNA biogenesis [BR:
nex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NE857_00925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
DUF2555
Motif
Other DBs
NCBI-ProteinID:
USY20264
LinkDB
All DBs
Position
204539..206062
Genome browser
AA seq
507 aa
AA seq
DB search
MPNTEFSRENDAAQDPSAQVNTSAGALSGAQRAAVTALVDSIQPVAEELGDRFDSHDQQL
AVVGGPVRDALLGRASNDVDLTTDAVPQRILELIDGWADSVWTVGIEFGTVGLRKRGLQL
EITTYRSEDYSPKSRKPEVSYGTNIHDDLLRRDFTVNAMAVRLPSQEFVDPFGGLEDLRA
KVLRTPGRPEDSFSDDPLRIMRAVRFAAQLGFSLAPEVAEAARNMADRLAIVSAERVRDE
FIKLMLSPDPRRGIELMVDLGIAEHVMPEIPKMRLEIDEHHRHKDVYEHSLTVLDQAMDL
ERKRGHEPDLVLRLAALLHDIGKPRTRAFEGGNRVTFHHHEVVGASMSRKRMNALRFPKD
VTANVSTLVALHLRFHGYGKGEWTDSAVRRYARDAGDQLERLHILTRADCTTRNRRKAAA
LARSYDDMERRISELAEQEELDRIRPDLDGNEIQEILGVKPGPLVGKAYRYLLELRLENG
PMEKEKVVAELRSWAAEHLEQEGRQEK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacacagagttttcgcgtgagaacgacgctgcccaggacccgtccgcccaggtg
aacacgtccgcgggcgcactcagcggtgcgcagcgggcggcggtcaccgcattggtcgac
tcgatccaacccgtcgcggaggaactgggcgaccgcttcgactcacacgaccagcagctc
gccgtcgtgggcgggccggtccgcgacgcgctgctcggacgcgcctccaacgacgtggac
ctcaccacggacgcggtgccccagcgcatcctggaactgatcgacggctgggcggactcc
gtgtggaccgtcggcatcgagttcggcaccgtgggtctgcgcaagcgcggactccagctg
gagatcaccacctaccgcagcgaggactactcgcccaagtcccgcaagcccgaggtgtcc
tacggcacgaacatccacgacgacctgctgcgccgtgacttcaccgtcaacgcgatggcg
gtgcgcctgcccagccaggagttcgtggaccccttcggcggcctcgaggacctgcgggcc
aaggtgctgcggaccccgggccgccccgaggactccttcagcgacgacccgctgcgcatc
atgcgcgcggtccgcttcgccgcccagctcggcttctccctggcacccgaggtggccgag
gccgcccggaacatggcggaccggctcgccatcgtctcggccgagcgcgtgcgcgacgag
ttcatcaagctcatgctcagccctgacccccgccgaggtatcgagctcatggtggacctg
ggcatcgccgagcacgtcatgcccgagatccccaagatgcggctggagatcgacgagcac
caccggcacaaggacgtctacgagcactcgctcaccgtcctggaccaggccatggacctg
gagcgcaagcgcggccacgagcccgacctcgtcctgcgcctggccgccctgctgcacgac
atcggcaagcccaggacccgcgccttcgagggcggcaaccgggtgaccttccaccaccac
gaggtcgtcggcgcgtcgatgagccgcaagcggatgaacgcgctgcgcttccccaaggac
gtgaccgccaacgtgagcacgctggtcgcgctgcacctgcggttccacggctacggcaag
ggcgagtggacggattcggcggtgcgccgctacgcccgcgacgccggggaccagctggag
cggctgcacatcctgacccgcgccgactgcaccacccgcaaccggcgcaaggccgccgcg
ctggcccggtcctacgacgacatggagcgccgtatctccgagctcgccgagcaggaggag
ctggaccggatccggcccgacctagacggcaacgagatccaggagatcctgggcgtcaaa
cccggtccgctggtgggcaaggcctaccggtacctcctggagctgcgtctggagaacggc
cccatggagaaggagaaggtcgtcgccgagctgcgctcctgggcggccgagcacctggag
caggaaggccgccaggagaagtaa
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