Nocardia farcinica IFM 10152: NFA_1030
Help
Entry
NFA_1030 CDS
T00207
Symbol
lysS2
Name
(GenBank) putative lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NFA_1030 (lysS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfa01007
]
NFA_1030 (lysS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfa03016
]
NFA_1030 (lysS2)
Enzymes [BR:
nfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NFA_1030 (lysS2)
Amino acid related enzymes [BR:
nfa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NFA_1030 (lysS2)
Transfer RNA biogenesis [BR:
nfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NFA_1030 (lysS2)
Prokaryotic type
Other AARSs
NFA_1030 (lysS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAD54945
NIH_Japan:
nfa1030
UniProt:
Q5Z3P6
LinkDB
All DBs
Position
complement(94188..97373)
Genome browser
AA seq
1061 aa
AA seq
DB search
MACLLWSLSPALRFLTGPPRRFVDDYYFDAPDTNVMWALIVGLLAGAIASRKRIAWWLLV
GYLTLFAVANGLRFAAEQNINALVAMIVQVGVVGLLIAAWPEFYTRVRRGAGWKALGVLV
GGLAIGCLLGWGLVEVFPGSLPPGWQRPGWAVYRVTAAILVENEHFGGHPRPFVNVLLGL
FGAIALLAAVLTLLRSQRAANAMTGLDESAIRGLLEHSDVEDSLGYFATRRDKAVVFAPS
GKAAVTYRVELGVCLASGDPVGVREAWPHAIDAWLRLADRFGWTPAVMGASEEGATAYRR
AGLSALRLGDEAVLDTRDFSLAGPELRQVRQAANRLRKQGVRVRIRRHREIPSAEFEQIM
ARADAWRDTETERGFSMALGRLGDPLDADCLLVEAVAADDRVLGMLSLVPWGRTGVSLEL
MRRDPQGPNGVMELMISQLALNSEQFGITRVSLNFAVFRSVFEEGGRIGAGPVLRLWRGV
LLFFSRWWQLEALYRSNVKYQPDWVPRFFLFEERRQLPRVAVASALAEGFLPRLGKDPDA
SAHTGAQSAVPDTLTGLHADGSPPDWPKPDLLDSGPRRPEQVRVRMAKLDRMTAAGVDAY
PVAYPPTHTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFALLRDWSDDIQLVIDRERVGA
ARSAEFGEYFDLGDLIEVSGQIGRSRSGELSLLAADWRMLGKCLHPLPDKWKGLADPEAR
VRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETPILQQVHGGANATPFTTH
INAYDLDLYLRIAPELYLKRLCVGGMEKVFELGRTFRNEGVDFSHNPEFTILEAYEAHSD
YIRMMHTCRVLIQNAALAANGSMVAMRPGADGALEPVDISGDWPVKTVHGAVSAAVGTEI
TPRTGVAELRELCDRVGVPYQHGWDEGQIVLEMYEHLVEARTEEPTFYVDFPTSVSPLTR
AHRSTPGVTERWDLVAWGVELGTAYSELTDPVEQRRRLTEQSVLAANGDPEAMELDEDFL
QALEHAMPPTGGLGMGVDRIVMLITGRSIRETLPFPLVKPR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
gtggcctgcctgctgtggagtctgtcgcctgcgctgcggttcctgaccgggccgccgcgc
cgcttcgtcgacgactactacttcgacgcccccgacaccaacgtgatgtgggcgctgatc
gtgggcctgctcgccggcgcgatcgccagccgcaagcggatcgcctggtggttgctggtc
ggctatctgacgctgttcgcggtggccaacgggttgcgcttcgccgccgagcagaacatc
aacgccctggtggcgatgatcgtgcaggtcggcgtggtcggcctgttgatcgcggcgtgg
ccggagttctacacccgggtgcggcgcggggccggctggaaggcgctgggcgtgctggtc
ggtgggctggcgatcggctgcctgctgggctggggcctggtggaggtgttccccggctcg
ctgccgccgggctggcagcggcccggctgggcggtgtaccgcgtgaccgcggcgatcctg
gtggagaacgagcatttcggcgggcacccgcgcccgttcgtcaatgtgctgctcggcctg
ttcggcgcgatcgcgttgctggcggcggtgctcacgctgctgcgctcccagcgcgccgcc
aacgcgatgaccggcctggacgagtccgcgatccgcggcctgctggagcattcggacgtg
gaggactcgctgggctacttcgcgacccggcgcgacaaggcggtggtgttcgcgcccagc
ggcaaggcggcggtgacctaccgcgtcgaactcggcgtctgcctggccagcggcgacccc
gtcggcgtgcgcgaggcctggccgcacgcgatcgacgcctggctccggctggccgaccgg
ttcggttggacaccggcggtgatgggcgcgagcgaggagggcgcgaccgcctatcgccgc
gcgggcctgtcggcgctgcgcctcggcgacgaagccgtgctcgacacccgcgatttctcg
ctggccggtcccgagctgcggcaggtgcggcaggccgccaaccggttgcgcaaacagggt
gtgcgggtgcgcatccgccgccaccgcgagattccgtcggcggagttcgagcagatcatg
gcccgcgccgacgcctggcgcgacaccgagaccgagcgcggcttctccatggcgctcggc
cgcctcggcgacccgctggacgcggactgcctgctggtggaggccgtggccgccgacgac
cgcgtgctgggcatgctctcgctggtgccgtggggccgcacgggggtgtcgctggagttg
atgcgccgcgatccgcaggggcccaacggtgtgatggagctgatgatctcgcagctggcg
ctgaactccgagcagttcggcatcacccgggtctcgttgaacttcgcggtcttccgctcg
gtgttcgaggagggcgggcggatcggcgcgggcccggtactgcggttgtggcgcggcgtg
ctgttgttcttctcccgctggtggcagctcgaggcgctgtaccggtccaatgtgaagtac
caacccgactgggtgccgcggttcttcctgttcgaggaacgcaggcagctgccgcgggtg
gcggtggccagcgccctcgccgaaggcttcctgccgcgtctgggcaaggatcccgacgcg
agcgcgcacaccggcgcgcagagcgcggtgcccgacacgctcaccggcctgcacgccgac
ggcagcccaccggactggccgaaacccgacctcctcgacagcggcccgcgcaggcccgag
caggtccgggtgcgcatggcgaagctggaccggatgacggcggcgggtgtggacgcctac
ccggtggcctacccgccgacccacaccgtcgccgcggcccggcggtcgccacgcgggacc
accgtgcgggtgtgcgggcggctgctgcgcatccgcgactacggcggcgtggtgttcgcg
ctgctgcgcgactggtccgacgacatccagctggtgatcgaccgcgagcgggtgggggcg
gcgcgcagcgcggagttcggcgagtacttcgacctgggcgatctcatcgaggtcagcggg
cagatcgggcgcagccgcagcggcgagctctcgctgctggccgcggactggcggatgctg
ggcaagtgcctgcacccgctgccggacaagtggaagggcctggccgacccggaggcgcgg
gtgcgccagcgctacgtcgacatggcgatcaacccggagacccgggacgtgctcgccaag
cgcagcgcggtggtccgctcgctgcgcgagtcgctgaactcctggggctatctcgaggtg
gagacacccatcctgcagcaggtgcacggcggcgccaacgccaccccgttcaccacccac
atcaacgcctacgacctggatctctacctgcgtatcgcgcccgagctgtacctcaagcgg
ctgtgcgtgggtggcatggagaaggtgttcgaactgggccgcaccttccgcaacgagggc
gtggacttcagccacaaccccgagttcaccatcctcgaggcctacgaggcgcacagcgac
tacattcggatgatgcacacctgccgggtgctcatccagaacgccgcgctcgcggcgaac
ggctcgatggtcgcgatgcggccgggcgcggacggcgcgctggagccggtggacatctcc
ggcgactggccggtcaagacggtgcacggcgcggtgtcggcggccgtgggcaccgagatc
accccgcggaccggcgtcgcggaactgcgcgaactctgcgaccgggtcggcgtgccgtat
cagcacggctgggacgagggccagatcgtgttggagatgtacgagcacctggtggaggca
cgcaccgaggaaccgaccttctacgtcgacttcccgacctcggtctcgccgctgacgcgg
gcgcaccgcagcacccccggcgtcaccgaacgctgggatctggtggcctggggcgtcgaa
ctgggcaccgcctacagcgaactcaccgacccggtcgagcagcggcgcaggctcaccgaa
cagtcggtgctcgccgccaacggcgacccggaggcgatggagctggacgaggacttcctg
caggcgctcgagcacgccatgccacccaccggcggcctcggcatgggggtggaccgcatc
gtcatgctcatcaccggccgcagcatccgcgagacactgccgttcccgctcgtcaagccc
cgctga
DBGET
integrated database retrieval system
