Candidatus Nitrosocosmicus franklandus: NFRAN_3029
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Entry
NFRAN_3029 CDS
T05935
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfn03016
]
NFRAN_3029 (miaB)
Enzymes [BR:
nfn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NFRAN_3029 (miaB)
Transfer RNA biogenesis [BR:
nfn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NFRAN_3029 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
GerPC
DUF4127
Motif
Other DBs
NCBI-ProteinID:
VFJ15352
UniProt:
A0A484IH46
LinkDB
All DBs
Position
NFRAN:complement(2688377..2689924)
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AA seq
515 aa
AA seq
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MEKDDELYSLKPSLIEKISFMNSHELSPKAKAKYIIGSVSKNVRDKHDKAFNFWIEGYGC
SANYSDMEIMSGILKQNGFNQADGPENADVTLIVTCSVKNSTEHKMINRIKSLTKTNKPL
IIAGCLPAANERMVRSLSPSASLLGPDSIPSIAEVTLATLQQRSVTELNKTNEEKINLPK
VRINPVISIIQISTGCLSECTFCQTKLAKGNLRSFRTGNIINQIKTDVEAGAKEIWLTST
DNGCYGLDIGTNIGNLLRSCEQIDMYFRIRLGMLNPMYLKNLDKEITNIYMSSNKLFKFI
HIPIQSGSVSILKKMKRGHTLNSVLDLTDRLKNNIPEITIATDVITGFPTETDKDFEETL
KVIKHIEPDIVNSSKFSSRPGTAASKMERVNDKIISYRSKLLHKLIKSIALRKNSKWKGW
KGEILIDDIENGILKGRNDYYKSIALREDPNNILEQEDNLIRKVGKVRKKNIDIRHTQLE
NSCLFNSAHMGQRMIVKVVSHSNHTLNAIPLELVN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacgacgaattgtattccttgaaaccctcgctaattgaaaaaatatccttt
atgaatagccacgaattatctcctaaggcgaaagcaaaatatatcattggctccgtttcc
aaaaatgtcagagataaacatgacaaagcatttaatttttggatagaagggtatggttgt
tctgccaactattcggatatggaaataatgtcaggaatcttgaaacaaaatggttttaat
caagcagatggcccagaaaatgccgacgttactttgattgtgacttgttcagtcaaaaat
tctaccgagcataaaatgataaaccggataaagagcttaaccaagaccaataaaccacta
ataattgcgggatgtttacctgcagcaaatgaacgaatggtaagatcccttagtccaagt
gccagtttgttaggaccagattcaatcccatcgatagccgaggtgacactagctacacta
caacaaagatcagtgacagagttaaacaagaccaacgaagaaaagatcaatttacccaaa
gtaagaataaaccctgtaattagtatcatacagatatctacgggttgtctaagcgaatgt
acattctgtcagacaaaattggcaaaaggaaatttaagaagttttaggacaggaaacatt
attaatcaaattaaaactgacgtggaagcaggtgctaaggaaatttggctgacttcaact
gacaacggatgctatggattagacattggtacaaatataggaaacttactcagaagctgc
gaacaaatagatatgtattttagaatccgattgggcatgctaaatcccatgtatttaaaa
aatctagacaaagaaatcacaaatatttatatgagtagtaacaagctttttaaatttatt
catattccaattcagagtggaagtgtatcgatcctaaagaagatgaaaagaggtcatacc
cttaactccgtactagatcttaccgataggttaaaaaataacattcctgaaataacgata
gcgacagatgttataactggtttcccaacagagacagacaaagattttgaagaaacgctg
aaagtaattaaacatattgagcccgatattgtaaactcctcaaaatttagctcgaggcca
ggaaccgcagcatcaaaaatggagagagttaatgacaagatcatttcttataggtcaaag
ctacttcacaaattaataaagagcattgcactcagaaagaattccaaatggaagggctgg
aaaggggaaattctaatcgatgatattgagaatggaattctaaagggaagaaacgactat
tataaatcaatagctctgagggaagaccctaacaacatattggagcaagaagataatcta
attcgtaaagtaggcaaagttaggaagaaaaacattgatattcgtcacacacaattagaa
aatagttgtttgtttaacagtgcgcatatgggtcaaagaatgatcgtcaaggtagtctca
cattccaatcacactctaaatgcgattccgttagaattagtgaattga
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