Nocardia farcinica NCTC11134: ERS450000_02435
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Entry
ERS450000_02435 CDS
T04524
Symbol
yjcD_1
Name
(GenBank) Putative ATP-dependent DNA helicase yjcD
Organism
nfr
Nocardia farcinica NCTC11134
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
SLFN-g3_helicase
AAA_22
AAA_30
PhoH
AAA_16
ResIII
Haem_oxygenas_2
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CRY77505
UniProt:
A0A0H5NNM8
LinkDB
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Position
1:2457360..2459597
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AA seq
745 aa
AA seq
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MALVVLATNNKSMPKLDGSIKNKVYDFFEKVRADDTLPGLHIEPIKGAVDPRVRTGRVDL
NYRAIMFRIDGKSVDTTYIYLGTWKHDVANKLAEKSTLRVNPVNGVLEGIVGELDGRADR
KKRTVVPDPTGELARLASRPTAGYLGHIGFTLADLTDRLGLDPDVAERALAAPDQDAVLA
VAQTTDVAWQQNALLELAVGRAIDDIRDTLGFTEQPVDESLDENEQILAALEHPATKMQF
TLVDDNAELRRVIEEGDFKAWRTFLHPNQRRYVEKSNRGAFRLSGGAGTGKTVVALHRAR
YLAELNPNARIVLTTFNKTLASTLEADLRALDPTLPIASRPGDPGVYVAGLDSLAQAVVS
KAAEHHYQAAAERVLGFGAGGRRRRRTGDDKGWPEAVRAAGDGLDPRLRHSSFLAPEYVG
VVLGNEITTVEQYARVPRAGRGVRLSRAQRTAVWRVIEEYRKLNRVNGTLSYPEVLAVAA
ALLRLRAENENRYLADHVIVDEAQDLHATHWRLLRALVPESPDDLFIAEDSHQRIYGQPV
VLNRLGINIRGRSSRLTLNYRTTAQNLQFAVGILEGADYQDLEAEAETTAGYTSARLGPK
PRLIECASAAQQYEAVASTVQQWLDRGDVQPGSVAVLTRGLHDRDDFVDELRRRGIPAAP
LDKEHATDDSVQVLTMHRAKGMEFRCVVLAGVDSDHVPAKVAVQVPEEEQAEARQRERSL
LYVAASRARDELVVTWCGTRSELLR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtggtgctggcgaccaacaacaagtcgatgcccaagctcgacggatcgatc
aagaacaaggtctacgacttcttcgagaaagtccgcgccgatgacaccctcccggggctg
cacatcgagccgatcaagggcgctgtcgaccctcgcgtccggaccggacgggtcgatctc
aactaccgagcgatcatgttccgcatcgacggcaagtcggtcgataccacctacatctat
ctcggcacctggaagcatgatgtggcgaacaagctcgccgagaagtccacgctgcgggtg
aatccggtgaacggtgtcctcgagggcatcgtcggcgagctggacgggcgcgcggaccgt
aagaagcggaccgtggtgccggatccgaccggggaacttgcccgcctcgcatcccggccg
acggccggatatctcggtcacatcgggttcaccctggcagatctgaccgatcgcctcggt
ctggatcccgatgtggccgaacgcgcccttgcggcgccggaccaggacgccgtgctggct
gtcgcgcagacgaccgatgtcgcctggcaacagaatgccctgctggagctggcggtcggc
cgggcgatcgatgatatccgcgacaccctcggcttcaccgagcagccggtcgacgagagc
ctcgacgagaacgaacaaatcctcgccgcactcgaacatcccgcgacaaagatgcagttc
accttggtcgacgacaacgccgaactgcggcgggtgatcgaagaaggggatttcaaggcc
tggcgcaccttcctgcatccgaatcagcgacgctacgtcgagaaaagcaatcgtggcgcc
ttccggctctcgggtggtgcgggaaccgggaaaaccgtcgtggcactccatcgggcgcgg
tacctcgccgagttgaatcccaacgcgcgaattgtgctgacaaccttcaacaagaccctg
gcatccaccttggaggccgatctgcgtgcgctcgatccgaccctgccgatcgcgagccgc
cccggagatccgggagtgtatgtggcaggactggacagccttgcccaggccgtggtctcg
aaggcagccgagcaccactaccaggccgccgcggagcgggtgctcggcttcggcgccggt
ggcagacgacgccgcaggaccggcgacgacaagggctggccggaagccgtgcgtgctgcg
ggtgacggtctcgatcctcgcctgcggcacagctcgttccttgcgccggaatatgtgggc
gtggtcctcggtaacgagatcaccaccgtggagcagtacgcgcgagtgccgcgggccggt
cggggtgtgcgattgtcgagagcgcagcgcaccgccgtgtggcgggtgatcgaggagtac
cgcaaactcaacagggtcaacggcacgctgagttatcccgaggtgctggccgtggcagcg
gcgttgctgcggctgcgcgcggagaacgagaatcgttacctggccgatcacgtgatcgtc
gacgaagcccaggacctgcacgcgacccactggcggctactgcgggccctggtaccggag
agtccggacgacctgttcatcgccgaggactcccatcagcgcatctacggccagcccgtg
gtgctgaaccgcttggggatcaacatccgtggccggtccagccggttgaccctgaactat
cgaaccaccgcccagaacctgcagttcgccgtcggcattctcgaaggcgcggactaccag
gatctggaggccgaggcggagaccaccgcgggctatacctccgcccgtctcgggccgaag
ccgcgcttgatcgaatgtgcttccgccgcgcagcagtatgaggccgtcgcctcgacggtg
cagcagtggctggaccgcggcgacgtgcagccgggcagtgtcgcggtgctcacccgtggc
ctgcacgatcgcgacgacttcgtcgacgagttgcgccgccgcggcatccccgccgcaccg
ttggacaaggagcacgccaccgacgactcggtccaggtgctcaccatgcaccgtgccaag
ggcatggagttccgctgcgtcgtcctcgccggggtggacagcgaccatgtacccgccaag
gtggcggttcaggtacccgaagaggagcaggccgaggcccgccagcgggaacgctcgctg
ctgtatgtcgcggcgagccgcgccagggacgagttggtcgtcacctggtgcgggactcgg
tcggagctcctgcgctga
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