Nothobranchius furzeri (turquoise killifish): 107375116
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Entry
107375116 CDS
T05163
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107375116
04020 Calcium signaling pathway
107375116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107375116
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107375116
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
DUF1758
Motif
Other DBs
NCBI-GeneID:
107375116
NCBI-ProteinID:
XP_015798964
LinkDB
All DBs
Position
sgr02:78264865..78487678
Genome browser
AA seq
2351 aa
AA seq
DB search
MARFADDLPTRYGGSASGAGRGGPGAGRGGIRAGQRMYKQSMAQRARTMAIYNPNPVKQN
CFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPANDKTPMS
ERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVIFAIVGMEFYMG
KFHHSCFSPTGDRVVDWPCGSEPPARTCPEGTVCRSYWIGPNFGITNFDNILFAVLTVFQ
SITMEGWVDVLYSTNDAVGNTWNWLFFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQNLSVLKR
GKIKKGKNDLIGAEEGEDRFADLSSVAPPGSPFGRASVKSGGKMDSSSYFRRKEKRFRFF
IRRMVKAQSFYWIVLCVVGLNTLCVAMVHYDQPEWLTTALYTAEFVFLGLFLTEMTLKMY
GLGGRNYFHSSFNCFDFGVIVGSICEVIWDIIKPGSSFGISVLRALRLLRIFKVTKYWNS
LRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAIL
TVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEEEQEEAANKKLAMQKALEVKEVSPMSAANISIAAFVKQNRDALSSRRSSVIS
IQSPKEQQRSAKSMSVWEQRTNQLRRHNLKTSNEALFNELDPEERLRMSSALHLHPDMKT
HTDRPLVVEATNGDKTSSGGQEEAGGGLRQDGLGDSFHSHSRRHHRHRDRNGEGGDGRGG
RHHAHHRNREHNPDSSQTKERRGSHDGGHRHRHRAGSPQKVGDAQEGEGDERSHRHHHSH
RLNEGNGRLANGEQEDSRGRGENNEEKGLRSRSAKAQSSLIGDECKQNRSYRDRQAHTEE
DSLTGSPPQPKRSSLTPSEKQEDADNQKNSTRASQAGLNSNTIRIPVTVTAPPGDTIIIP
MNNIDRDNFQLSEEKKDLEEEEEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYFE
MCILMVITMSSITLAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVVKMIDLGLLLHPGS
YFRDLWNILDFIVVSGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKTI
KRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKSLERNC
RGQFLDYDKDAVTAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATYEDQ
GPSPGFRMETAIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDF
AINAKPLTRYMPENKQSFQYKMWKFVVSSPFEYAIMTLIALNTVVLMMKFYDAPAEYESM
LKYLNIIFTGLFTLECILKIIAFNPLNYLKQPWNVFDFVTVIGSITDILFTEINTNKMIN
LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN
IKLNEETAINHHNNFQTFFQALTLLFRSATGEAWHEIMLACLSNRPCDKLSGTSGKECGS
DFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAAC
GRITYRDMYEMLRDMSPPLGLGKKCPPRIAYKRLVRMNMPIADDNTVHFTSTLMALIRTA
LDIKLASGVLAQRLCDADLKRELNRVWPSLSQKTIDLLVTPHKYNELTVGKVYAAHMIFD
FFKQNRAKKLEQQNPSGAHQSKLGALFRPMLPFSHIHDVEPPVISPKQAIPLEPEAPPIN
ASSNGEMILSKRSNMKHSQSGDVSQAAQRPKTRRRLQRGQSEDVQYSIRPQEQVEQKQVD
NMSDSEGYPCLEGHGRAASLPRLNAEYYRSHPRHAPGTHLAPIIDLSPIKRSASSLSPQR
HLQEVELREYSLEHVRHQSATDPQQDRSHHHHHHHCHRRRDNDKDKKQKSLDTTSSVPPS
STLGSFIDPQDEGLSRERARERDRSRPHERRHHSSVGEKQRYYSCERYGTREQGHARSAG
PSRSTSPGEGQDSGFLKQQGSFAVKSGPPSGTSTQGRGRRQLPQTPLTPRPAVAFKTVSS
SAPSSSSGAAATGHQSRFIRGVSEHDRLLEGHDESQIPVTGPGSDSSRQQVDSSQQALHE
EGEDFQDAVSSHGGGHSVRTTASSSQGSAAAPTTGRVGGVPNGYHFTLGSGPGSGSRGIG
GLRDKEEDDWC
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgctgacgatcttcccacccggtatggaggaagcgcgagcggcgcgggg
agaggaggaccgggcgccgggagagggggcatccgggcagggcagaggatgtacaagcag
tcgatggcccaaagagcccgaaccatggccatttacaacccgaaccccgtcaagcagaac
tgcttcactgtgaaccgctccctcttcatcttccgagaggacaacctcatcaggaagtat
gcaaagagaataactgagtggcctccatttgaatacatgatcctggcaacgattatcgcc
aactgcatcgttttggccctggagcaacatctacctgccaatgacaagacgcccatgtca
gaacgcctggacgacacagagccctactttattggaatattctgtttcgaggccgccatt
aagatcatcgccttgggctttgcgtttcacaaaggctcatacctccgcaacggctggaat
gtaatggactttgtggtcgtcctcacagggattcttgccacggtaggctcagactttgac
ctaagaactctgcgagccgtgagagtcctgaggcccctgaagctagtgtcgggaatcccc
agtctccaggtggtgttgaagtctataatgaaagccatggttcctctgctgcagatcggc
ttgctgcttttcttcgccatcgtcatctttgccattgtcgggatggagttctacatgggc
aaattccaccactcctgtttcagtcccactggtgatagggtggtcgactggccttgtggt
tccgagccaccagccagaacttgtcctgaaggaaccgtctgcaggtcttactggatcgga
cccaactttggcatcaccaactttgacaacatcctgtttgcggttcttaccgtgttccaa
agcatcaccatggagggctgggtggatgtcctctacagcaccaacgatgccgtgggaaac
acgtggaactggctcttcttcatccctctcatcatcatcggctccttcttcatgctcaac
ctggtgcttggtgtcctgtcaggagaatttgccaaagagcgagagcgagtggagaaaagg
caggagttcctgaagctccgccggcagcagcagattgagagagagctcaccggatacttg
gagtggatctgcaaagcagaggaggtgctgctggaggaggaggacgagattgctgaggag
aaatcgccgctggacggagcgtggtacaagaggaaacaaaacctgtcagttctgaagaga
gggaagatcaagaagggtaaaaatgacctgatcggtgcagaagagggtgaagatcgcttt
gccgacctgtcgtctgtcgccccccccggctctccgttcggccgggccagtgtgaaaagc
ggcgggaagatggacagctcctcctactttcgccgtaaagagaagcggttccggttcttc
atccgccgaatggtgaaagcccaaagtttctactggatcgttctatgcgtggtgggcctc
aacaccctgtgtgtggccatggttcattacgaccagccggagtggcttacaacagctctc
tacaccgcagagtttgtgtttctgggcttgtttctgacggagatgacgttgaagatgtac
ggcctcggagggaggaattacttccactcgtccttcaactgcttcgacttcggggtgatt
gttggaagtatatgtgaggtcatctgggacataataaagccgggatcctcgtttgggatc
agtgtgctgagggccttgagactactcaggattttcaaagttaccaaatattggaactcg
ctgaggaatcttgtcgtctccctcctcaactccatgaagtccattatcagcctgcttttc
ctgctcttcctcttcatcgtggtctttgctctgcttggcatgcagctcttcgggggacaa
tttaactttgaagatgaaacaccaacgacaaactttgacacctttcctgcggccatcctg
acggtgttccagattctgactggtgaggactggaacgctgtgatgtaccacggcatcgag
tcgcagggtggagttcgacgtgggatgttctcctccatctacttcatcgttctcacgctg
tttggaaactacaccctcctgaatgtcttcttggccattgctgttgataaccttgctaat
gcccaggagctgactaaggatgaagaggagcaggaggaggcagccaataagaagctggca
atgcagaaagctttggaggtgaaagaagtcagcccgatgtctgccgccaacatctccatt
gctgcttttgtaaagcaaaatcgagatgcactgtcgtctcgcaggtcgtccgtcatcagc
attcagtcacctaaggagcagcagcggtctgccaagtccatgtcggtgtgggagcagagg
accaaccagctgaggagacacaacctgaagacgagtaacgaggccttgttcaacgagctg
gaccccgaggagcgccttaggatgtcctccgccctccatctgcatcctgacatgaaaact
cacacggaccgacccctggtggtggaggccacgaacggtgacaaaaccagcagcgggggt
caggaggaagcgggaggagggctccgacaagacgggctgggggacagcttccacagccac
tccaggagacatcaccgccatcgcgacaggaacggagagggaggcgacgggcggggaggg
aggcaccatgctcatcatagaaacagggaacacaacccagacagttcccaaactaaagag
aggagagggagccacgatggaggacaccggcaccgccaccgagctggatctcctcagaag
gtcggtgatgcacaggaaggagaaggggatgaaagaagccatcgccaccatcactctcac
cggctaaatgaagggaacggacgtttagcaaacggcgagcaggaagacagtcgaggaaga
ggagaaaataacgaagagaaaggtctccgctctcgttcggctaaagctcagtcttctctg
attggagacgagtgtaagcagaacagaagttacagagacaggcaggcacacacggaggag
gacagcctcactgggagtccgccacagcccaagcggagcagcttgactcccagtgagaag
caggaggatgccgacaaccagaaaaactccaccagagccagccaggccggtctgaacagc
aacaccatccgcatcccggtcaccgtcacggctccacctggagacaccatcatcattccc
atgaacaacatcgatcgtgacaacttccaactcagtgaggagaagaaggacctggaagag
gaggaggaggcagctaacgggcctcggcagatcctcccgtacagctccatgtttgttttt
ggacaaacgaacccggtgcggcgcctgtgtcactatgtggtcaacctgcgctacttcgag
atgtgcattctgatggtcatcaccatgagcagcatcacgctggcagccgaggaccccgtg
caggccaatgcaccgcggaacaacgttctcaaatatctggattacgtcttcactggagtg
tttacttttgagatggtggtcaagatgattgacctgggccttctcctccatcctggctct
tatttccgggacttgtggaacattctcgacttcatcgtggtcagcggagctctggtggcg
tttgcctgctcgagccttatgggatctcaacaaagcgtggccagagggaccaaagggaag
gacatcaacaccatcaagtccctccgggtcctccgagtcctacggccgctcaagactatt
aaacggctgccaaagctgaaggccgtgttcgactgcgttgtcaactctctgaagaacgtt
ctgaacatcctgatagtctacatcctcttcatgttcatctttgccgtcatcgccgtgcag
ctctttaagggtaaattcttctactgcaccgacgagtccaaaagcctggagaggaactgc
agaggtcagttcctggattacgataaagacgcagtgacagctcagcccagagagtggaag
aagtacgagttccactacgacaacgttctctgggcttttctaacgctcttcaccgtctct
accggagaggggtggccactggtcttgaagcactctgttgacgccacgtacgaggaccag
ggccccagccccggcttccgcatggagacggccatcttctatgtggtctactttgtggtg
tttcccttcttcttcgtcaacatttttgtggctttgatcatcatcaccttccaggagcaa
ggagacaaggccatgtcggagtgcagcttggagaagaatgagagggcctgtattgacttt
gccatcaacgccaagccgctcaccagatacatgccagagaacaagcagtcctttcagtac
aagatgtggaagtttgtggtgtcgtcaccgttcgagtacgccatcatgactttaatcgca
ctgaacactgttgttctgatgatgaagttctacgatgctccagctgagtacgagtcaatg
ctaaaatacctaaacatcatcttcaccggcctcttcacgctggagtgcatcctcaagatt
atcgccttcaaccctctgaactacctgaaacaaccctggaacgtgttcgactttgtgact
gtcattggaagcatcacggacattttgttcacagagataaatacgaacaagatgataaat
ctgagtttcttgaggctgttcagagcggctcgtctcattaagctgctgcgacagggctac
actatccgcatcctgctgtggacgttcgttcagtccttcaaggcgctgccgtatgtctgc
ctgctaatcgccatgttgttctttatctacgccatcatcgggatgcaggtgtttggtaac
atcaagttgaacgaggaaaccgccatcaatcaccacaacaactttcagaccttcttccag
gccttaacccttctgttcaggagtgcgacgggcgaagcgtggcatgagatcatgttagct
tgcctcagtaaccggccgtgcgacaaactctcaggaacttcagggaaggagtgtggaagc
gattttgcctacttctactttgtctccttcatctttctctgctccttcctgatgttgaat
ctttttgttgctgtcataatggacaactttgagtatctaacacgggacgcctccatcctc
ggacctcaccaccttgatgaattcatccgtgtgtgggcagaatatgaccccgctgcctgt
ggacgcataacttaccgtgacatgtacgagatgctacgtgacatgtctcctccgctaggt
ttgggaaagaaatgtcctccccgaatcgcctataagcgactggtgaggatgaacatgccg
atcgctgacgacaacacggtccacttcacttccacgctgatggctctgatccgaaccgcc
ctggatatcaaactggcatctggcgtcctggcgcagcgtttgtgtgacgctgacctgaag
agggagctaaaccgggtctggcccagcttgtctcagaagaccatcgacctgctggtgacg
cctcataaatataacgagctgactgtggggaaagtctacgctgctcatatgatctttgac
ttcttcaaacagaaccgagcaaagaaactagagcagcagaacccgtctggagctcatcag
agtaaactgggagcgctgttccgtcccatgctgcccttcagtcacatccatgatgtcgag
ccgccagtcatcagccccaaacaggccatcccactagaaccagaagccccgcccatcaac
gcttcctccaacggagaaatgatattaagcaagaggagcaacatgaaacattcccagtct
ggagacgtttctcaggcagcgcagagacccaaaacccgtaggaggctgcagagaggccag
tcggaggatgtgcagtactccatcagaccacaggaacaggtggagcagaagcaggtggac
aatatgtccgactccgagggatatccgtgcctggagggtcacggcagagcggcgtcgctg
ccccgactcaacgccgagtactaccggagccaccctcgccacgcccccgggactcacctg
gcacccatcattgacctcagccccataaaacgctcggcgtcctctctgtcgccacagcgc
cacctgcaggaggtagagctgagggaatacagcctggaacatgttcggcaccagtctgct
acagatccccaacaggacagaagccaccatcatcaccaccaccactgccatcggcgcagg
gacaacgacaaagacaagaagcaaaagtctctagatacaacgtcatcagtgccgccgtcc
agcactcttggttcatttatcgacccccaagatgagggtttgtccagagaaagagcgagg
gagcgggatcgcagtcgcccccatgagaggagacaccactcgtcagtcggggagaagcag
cggtactactcctgtgagcgctacggcaccagggagcagggtcacgccaggtcagccggt
cccagcaggtccacgtctccaggagagggtcaggactccgggttcctcaaacagcagggg
agctttgcagttaaatccggtcctccctctggtaccagcacacaaggtcgtggtcgcagg
cagctcccccagacgccactcacacctcgtcctgctgtggctttcaagaccgtcagctcc
tctgctccatcctctagctctggcgccgctgcgacgggacaccagagtcgcttcatccga
ggagtttcggagcacgaccgcctgctcgagggccacgatgagtcccagatacccgtcacc
ggtcccgggtcagactccagccggcagcaggtagactcctctcagcaggcccttcatgaa
gagggcgaggacttccaggatgctgtgagcagccatggagggggacacagcgtcaggact
actgcgtcatcctcacagggaagcgccgccgcacccaccacaggacgggtgggtggggtg
cctaacgggtaccacttcaccctcgggtctggacctggatctgggagcaggggaatagga
ggtctcagggacaaggaggaggatgactggtgctaa
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integrated database retrieval system
