Nothobranchius furzeri (turquoise killifish): 107382649
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Entry
107382649 CDS
T05163
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03271
Virion - Rotavirus
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04514
Cell adhesion molecules
nfu04530
Tight junction
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
107382649 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107382649 (itgb1)
04514 Cell adhesion molecules
107382649 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107382649 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107382649 (itgb1)
04530 Tight junction
107382649 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107382649 (itgb1)
04810 Regulation of actin cytoskeleton
107382649 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107382649 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107382649 (itgb1)
04515 Cell adhesion molecules [BR:
nfu04515
]
107382649 (itgb1)
04090 CD molecules [BR:
nfu04090
]
107382649 (itgb1)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107382649 (itgb1)
Exosome [BR:
nfu04147
]
Exosomal proteins
Proteins found in most exosomes
107382649 (itgb1)
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin beta subunits
107382649 (itgb1)
CD molecules [BR:
nfu04090
]
Proteins
107382649 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
107382649
NCBI-ProteinID:
XP_015810361
UniProt:
A0A8C6P9N2
LinkDB
All DBs
Position
sgr08:complement(27761135..27796866)
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AA seq
804 aa
AA seq
DB search
MEQHMDLRLILMTFGLFFCCHASKEGNECINANAKYCGECIQAGAKCGWCTDPNFLKQGE
TVSSRCDEVESLIKRGCNLTLIENPVGKQRVLKNIPVTNRGKNKKLKPEEITQIQPQKLD
ITLRSGEPQSFNLTFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMTKITSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTGDQTCTSPFSYKNVLKLTSNGSLFNTLVGQQH
ISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTL
SANSSNVINLIVDAYNSLSSEVILENSKLPDGVTIAYTAHCKNGVVNEGENGRKCSNISI
GDEVKFSISITSKGCPTKTKLKPIKIKPLGFTEELEIHLNFICECECHKKGIKDSPDCHF
GNGTYECGACRCNEGRVGRNCECSSNEISTEDMDLACRNKNSTDICSNNGECVCGKCECK
TRENPNERYSGKYCECDNFNCDRSGNLLCGGHGRCECGKCVCDPMWSESACDCSLDKSTC
LASNKQECNGRGTCKCGSCKCTDPKFQGPTCETCPTCPGVCAEHKECVECKAFGTGEKKD
TCQQECSDFNLIEVKSRDKLPQPHETPYPVMHCKERDANDCWFYYTYAVKNKTEKVVHVV
EKPECPTGPDIVPIVIGVVVGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDTQ
ENPIYKSPINQFQNPSYGRKGAVL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcatatggatctgaggctgatcctgatgacatttggactcttcttttgctgc
catgctagtaaagaggggaatgagtgcatcaacgccaacgccaaatactgcggagagtgc
atccaggcgggagccaaatgtggttggtgcacagacccaaacttcctgaaacaaggtgag
accgtgtcgagccgttgtgatgaagtggagtctctgatcaaaaggggctgtaacttgacg
ctgatcgagaaccctgttggaaaacaaagggtcctcaagaacattccggtcacgaatcgc
ggaaaaaacaaaaaattgaagccagaggaaatcactcagatccagccccaaaaactagac
atcacactccgatctggtgagcctcagtcctttaacttgaccttcaagcgggcagaagat
tatcccatcgacctgtactatttgatggacttgtcctactccatgaaggatgatttggag
aatgttaagaacctgggaacaagcctgatgctggagatgacgaagatcacctctgacttc
aggataggttttggatcatttgtggagaagaccgtcatgccctacataagcaccacccca
gccaagctgctgaacccatgcacaggcgaccaaacctgcaccagcccattcagctacaag
aacgtgctgaaactgaccagtaacggctcgttgttcaacaccctggtgggtcagcagcac
atctctggaaacctggactcccccgagggcggttttgacgccatcatgcaagtggctgtg
tgcggggatcagattggctggaggaatgtgactcgactgctcgtgttctccactgatgct
ggcttccactttgctggtgatggcaaactgggtgggattgttctgcccaacgatggaaag
tgtcacttggagaacaatatttacacgatgagccactattacgactacccgtctatcgct
caccttgtccagaagttgagcgacaacaacattcaaacgatctttgcagtcactgaagag
ttccagcctgtctaccaggagctgaaaaatctgatccccaagtctgcagtcggcacgctt
tctgccaactccagcaatgtcatcaacctaattgtagatgcttacaattctctatcatca
gaggtgattctggagaacagcaagctcccagacggggtgactatagcatacacggctcac
tgtaagaacggcgtggttaatgagggtgaaaacggcagaaagtgttccaacatctccatc
ggagacgaggtcaagtttagcatcagcatcacatctaagggctgtccaaccaaaaccaag
ctcaaacccattaagatcaaacctctgggattcacagaagagttggagattcatctaaac
ttcatctgtgagtgtgaatgccacaaaaagggcatcaaggacagtccagattgtcatttt
ggtaatgggacctacgagtgtggagcctgcaggtgtaacgagggtcgcgtgggcaggaac
tgcgagtgtagcagcaacgaaatatccacggaggacatggacctggcctgccgtaacaag
aacagcaccgacatctgcagcaacaacggagagtgtgtgtgtgggaagtgtgagtgcaag
acgagggagaacccaaacgagaggtacagcggcaagtactgcgagtgtgacaacttcaac
tgtgatcgctccggaaacttgctctgcggaggacacggacgctgtgagtgtggaaagtgt
gtctgtgatcccatgtggagcgaaagcgcctgtgactgttctctggacaaaagcacgtgt
ttggccagcaacaagcaggaatgcaacggcagagggacctgtaaatgtggcagctgcaag
tgcacagaccccaaattccagggtcccacgtgtgaaacgtgtcccacctgcccaggagtc
tgcgccgagcacaaagagtgcgtcgagtgcaaagcgttcggcaccggcgagaagaaggac
acgtgtcaacaggaatgcagtgacttcaatctgattgaggtgaagagcagagacaagctg
ccccagccccacgaaaccccctaccccgtcatgcactgcaaggagagggacgccaacgac
tgctggttctactacacctacgcagtcaagaacaagacagagaaggtggtccatgtggtg
gagaagccggagtgccccactgggcccgacatcgtccccatcgtgatcggcgtggtggtc
ggcatcgtcttgatcggcttggccctgctgttcatctggaagctgctgatgatcatccac
gacaggagggagtttgccaaatttgagaaggagaagatgaacgccaaatgggatacacaa
gaaaacccaatttacaagagtcctatcaatcagttccagaacccaagctatggacggaaa
ggcgctgttctttaa
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integrated database retrieval system
