Candidatus Nitrososphaera gargensis: Ngar_c01620
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Entry
Ngar_c01620 CDS
T02305
Symbol
rfcL
Name
(GenBank) replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ngar_c01620 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nga03032
]
Ngar_c01620 (rfcL)
DNA replication proteins [BR:
nga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
Ngar_c01620 (rfcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_22
AAA_16
AAA_14
AAA_5
AAA_28
AAA_7
AAA_25
Rad17
AAA_33
bpMoxR
ABC_tran
AAA_18
RuvB_N
TIP49
AAA_30
AAA_11
Mg_chelatase
AAA_17
nSTAND3
IstB_IS21
RsgA_GTPase
RNA_helicase
DUF815
AAA_19
TsaE
AAA_3
ATPase_2
NACHT
Ploopntkinase3
AAA_29
AAA_8
TniB
NTPase_1
Sigma54_activ_2
Zeta_toxin
DUF5906
Bac_DnaA
AAA_24
SRP54
AAA_6
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFU57111
UniProt:
K0I772
LinkDB
All DBs
Position
129715..130953
Genome browser
AA seq
412 aa
AA seq
DB search
MMWSEKHRPKTVQEMVGNEDTRLAALKWLAGWVSGSKPLLLVGPPGTGKTTLVHALARQF
DYDLVEMNASDARNKDILRARITPVFQNTANLLGRKIMLFLDEVDGISGREDTGGLDTLV
ELMKEPTVPVIMAANEKSIKIKDLSKVCKTVEFSPVPPRLLLLFLDHVLQSEGAKLGPRD
KISIVNNSRGDIRSMLNSAQSRVAGYATVSNRDIVDIDIVDAVNGYFNASSLEQATRFIT
KADALYPDPRYGMSQEDRRKDMLAALFSSIVSSHVEHDDMASMLEVLSRADMMVGRANAR
REWRLLKYISSMIASGLYERSRQKGIKYSQYAMPWPVMGPIFARSQSTRKILGELAPALH
MSRSSAGSFALPYFIRLIIEEKVDPIEFAVDNFRDESVGESIAKEIEKAKRK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggtctgaaaagcaccggccaaagacggtacaagaaatggtgggcaacgaggac
acccggcttgcagcgctaaagtggctggcaggctgggtgagcggtagcaagccgctgctg
ctggtcgggccgccgggcaccggcaagaccacacttgtgcacgcgcttgcaaggcagttc
gattacgacctagtggagatgaacgcaagcgacgctcgcaacaaggacatactccgggca
aggataacacctgtcttccagaacactgcaaacctgcttggcagaaagataatgctgttt
ctggacgaggttgatggtatctcaggcagggaggacacgggcgggcttgacaccttggtg
gagctcatgaaagagccgacggtgcccgtcataatggccgccaacgaaaagtccatcaag
attaaagacctctccaaggtgtgcaagacagtagagttcagccccgtgccgcctcggctg
ttgttgctgttccttgaccacgtgctccagagcgagggggcaaagcttgggccgagggac
aagatatcgatcgtcaataacagcaggggcgacatccgctcgatgctcaacagcgcccag
tcgcgtgtcgccggctatgccacggtatcaaacagagacattgtggatattgacattgta
gacgcggtaaacggctactttaacgccagcagcttggagcaggcgacgcgcttcataaca
aaggcagacgcgttgtacccggatccaaggtacggcatgtcacaggaagaccggcgcaag
gacatgctggccgcccttttctcaagcattgtctcttcgcacgtcgagcatgacgacatg
gcttccatgctcgaagtcctgtcaagggcagacatgatggtcgggcgcgcaaacgcaagg
agggagtggcgcctgctcaaatacataagcagcatgatcgcgtcagggttgtatgaaagg
tcgcgccagaaagggatcaagtacagccagtatgcgatgccctggccggtcatggggccg
atatttgcccgctcgcagtcgacaaggaaaatcttgggcgagcttgcgccggcgctccac
atgtcaaggagctctgccggctcgtttgccctgccatacttcataaggctgattatcgaa
gaaaaggtagacccgatcgagtttgcagtggacaactttcgcgacgagtcggttggcgag
tctatagcaaaggagatcgagaaggcgaagaggaaataa
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