Nannochloropsis gaditana: NGA_0401310
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Entry
NGA_0401310 CDS
T02917
Symbol
PEX1
Name
(RefSeq) peroxin-1
KO
K13338
peroxin-1
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NGA_0401310 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngd04131
]
NGA_0401310 (PEX1)
Membrane trafficking [BR:
ngd04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
NGA_0401310 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
TB2_DP1_HVA22
RuvB_N
AAA_33
AAA_14
AAA_lid_3
RNA_helicase
TIP49
AAA_28
AAA_29
Zeta_toxin
AAA_5
Rad17
AAA_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
17361490
NCBI-ProteinID:
XP_005854717
UniProt:
K8YSN2
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MGSGGDVDSYYSGAGALTTPSIPVLLRALEARLSIEEAGRPPCRGSCAPLGSLRSYEILL
RYHNKQDQSAKSLGPTNVTTKQRLHGMTLELQRAHRYEAAEALDLVVAWLLRFEEEQERH
PHSNGDKGSVFPSSSVLTVLSLLAGAPGLVEESAGIGARNLGPLATGLLTRSRQQTPESD
AVLRPEHRSKQGHVPPGPSRRLEVARRGCRHLGETWARTRGEKALEPVLEHPALPTRVAS
DWNVMGERRLMDGDAHQEGTGLCGATLYPSWVFSTLPEPRPTLEMGPPTSALKMSEAERF
LAKPWTDASFLSSLGPLRPAGARPALAVPDVGGRLTLPPLSDTRAQDPLDRVLRSRAWRQ
ADTAPLPSAHGVEASRRPPPVASPSQDAPPPHPPLPATNPCITPPPQPPCRPSLSPCLGW
ESTWATGGGPHWVPPSPRLLSQEPSPALDAVLPPSRPGPVLEQHMLVDAVFQALRGLPSQ
AFLLDTQGLSLQPRPYLRVVGSSTGSIQRALDGVAVAGTCFLRLQTLSAYLGSQRLLTTT
GSGGRAGWKVGGRAVSQVYQAFAAVLGRELACWAARVEEERESAGIRWAQKGHSPGNQRQ
ASVLEVWKAKMEEIGALFLAANGGRGSPRWGGGGRRAGRLQGRWDEVQACLRHLAPVLDP
RAAGLRVCVGIPPPGALLVHGPQESGKTTLVHAVTAHVARSPWAVGTVWVPCLALRGLKM
EAVLQALAGAMAQAAAKAPALLVLDDLDALCPAENEEAGEANVQAAEIAEAIGKMLEEAR
EETRVREEVMRVAAGGARRLWQAGPGAQGGREGATEVGEEPGAGQTMSPVAGEGKGENRI
EAGTWSKPPSEAWVILGAAAVSSAVALVATVRDPSLLHASLRRPGGVEALVEIPPLDAKA
REAILAALLAQHSSNHSFPSSPSLGPSAPPSPARPAPDRPLSVVPGVDVAELAARLEGCT
SLDLEVLVTRILHAAVGRSLRELGDTASASTVDPRPAVLPADVTDALEGFSAASHRNARL
SSSGTSWADVGGLEEIKNEVREILEMPVKFAPLYARLPTRLPTGLLLHGPPGCGKTLLAG
AVARECGLNFISIKGPEVLDKFIGASEQAVRALFARATAAAPCLLFFDEFEALAPRRGSD
NTGVTDRVVNQLLTFLDGVEGRTGVYVMGATSRPDLVDSALLRPGRLDRQLYLGFPDAGE
SLGILKALVRKMSLTPQATAALEKVALADGADLMTGADWQAMVSTAQLEAVHEKLAAMGT
TKTGNGAGGEKESSQGGDGGEGVVVTAQHLWAAFAATRPSIPPGERAKLQAIYDKFRKSR
DGDYKDSTNIGPGTSMSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDM
EKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFF
IQYFLLFNALNLLETFLPLSRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLG
IALGASGAEQSRPGGGGRKRGGGRENTGEGRFGARDGSGEGASIHLRIELAARGLEKPAE
PERLDTLCQLRILPMTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTT
EDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtggcggggatgttgatagttactacagtggagcaggagcgcttaccaccccc
agtatccctgtgctgttgcgggctcttgaggcccggctgtcgatagaagaagcaggaagg
ccaccatgtcgaggaagttgtgcaccgcttggcagtcttcgaagctatgaaatcctgctg
cggtaccacaataagcaggatcagagtgccaagagcttagggccaaccaatgtgacgaca
aaacaacgtcttcatgggatgaccttggagctacagagggcgcaccggtatgaggcggca
gaggccttggacctagttgtcgcgtggctgttacgatttgaagaggaacaagaacgtcac
cctcacagcaatggagacaaaggctcggtgtttccttcatcctccgtcctgacggtcttg
tctctgttggcaggcgctcctggcttggtggaagagagtgcgggcatcggagccaggaac
ctgggtcctttggctactgggttgttaacacggtctaggcaacagacccccgagtcggac
gccgtgttacgaccagagcatcgcagcaaacaaggacatgtgccaccagggccctcaagg
agactggaggtggccagaaggggatgtcgacatctgggagagacgtgggcacgcacgcgt
ggggagaaggcactggagccagtattagaacatccagccctcccgacccgggtagcatcg
gattggaacgtgatgggggaacgaaggctgatggatggggacgcccaccaggaaggtact
ggcttgtgcggcgccaccctttatcccagctgggtcttctccactctccccgagccccgt
cccaccctggagatgggcccccccacgtctgccctgaaaatgtctgaggccgagcgtttc
ctggccaaaccctggacggacgcgtcgttcttgtcctcgttgggtcccctccgcccggcg
ggggcccgccctgccttggctgtccccgatgtgggcgggcgcctgacccttccccctctc
tcggacacgcgcgcccaggacccgctcgaccgtgtcctccgctcccgggcttggcgtcag
gctgacacagcacccctgccctcggcacatggggtagaggcttcccgtcgtcctccccct
gtcgcctcgccaagccaggacgcgccgcccccccatccgccgctgccggccacgaatccg
tgcattaccccacccccacagcctccctgccgaccctccctaagcccgtgcttgggctgg
gaaagcacttgggccacaggcggaggtccccactgggtgccgccctccccccgccttctc
tcccaggagccctccccggccctggacgccgtcctccccccttcgcgccccggacccgtc
ttggaacagcacatgctcgtggacgcggtcttccaggcgctccgaggcctcccctcccag
gctttcctccttgacacccagggcctgtccctccagccgcggccctacctccgggtagtc
ggcagcagcacagggagcatccaacgcgccctggacggcgttgcggtggccggtacttgt
tttctccgccttcagaccctcagcgcttatctcgggagccaacgtcttctcaccaccacc
ggtagcggtggcagggcgggctggaaggtgggggggagggcggtcagtcaagtctaccag
gccttcgcggccgtcctgggtcgcgagcttgcgtgttgggcggcccgcgtggaagaggaa
cgggaatctgcggggattcgatgggctcagaagggtcatagcccgggaaaccagcgccag
gcgagcgtgctggaggtctggaaggcaaagatggaagaaataggtgctttgtttctggcg
gcgaacggtggacgtggaagtccccgctggggaggcgggggcaggcgggccgggcgcctg
cagggtcgttgggatgaggtccaggcctgtctccgccacctcgctcccgttttggacccg
cgagcggccggtctccgcgtctgcgtcgggatcccgcctccgggggcactgctcgtgcac
gggccccaggaaagcgggaaaaccacgctcgtccatgccgtgacggcccatgtggccagg
tccccgtgggcggtggggacggtgtgggtgccgtgtttggctctccgggggctgaaaatg
gaggcggtgctccaagcattggcgggcgccatggcccaagcggcggccaaagcgcccgca
ctcctggttttggacgacttggatgccctctgcccggcggagaacgaggaagcaggagag
gcgaatgtacaagcggccgagatcgccgaggccatcgggaagatgctggaggaggcgcgg
gaggagacgagagtccgggaggaggtcatgagggtggcggcggggggggcaaggaggctg
tggcaggcgggacccggcgcccagggagggagggaaggagcgacggaggtaggggaggag
ccgggcgcggggcaaacaatgtcacctgtcgcaggggaagggaagggggaaaatcgcatc
gaggctggcacgtggtccaagccgccatccgaggcctgggtcatcttgggagctgccgcc
gtgagtagtgcggtcgccctggtcgccaccgtccgggaccccagcctcctccacgcttcc
cttcgtcggcccggcggggtggaggctttggtggaaatcccccccctggacgccaaggcc
cgcgaggcaatcttggccgcgctcctcgcccagcactccagcaaccattctttcccctcc
tcaccctcccttgggccctccgccccgccctcccctgcccggcctgcgcccgaccggccc
ctgtccgttgtccccggcgtcgacgtggccgagctggccgcccggttggagggatgcaca
tccctcgacctggaagtcctggttacccggatcctccacgcggccgtcgggcgctcgttg
cgcgagcttggtgacacggcctccgcctcgaccgtcgatccccgcccggccgtcctccct
gccgacgtcactgacgccttggaaggctttagcgctgcctcccatcggaacgcccgcctc
tcttcctccggcacgagctgggccgacgtgggtggtctggaagagatcaaaaacgaagtg
cgcgagattttggagatgcccgtaaagttcgcccctctgtacgcccgccttcccacccgc
ctgcccacaggtctgttgctgcacgggccaccggggtgcggtaaaaccctgctggcaggg
gcggtggcgcgggagtgtgggctgaatttcatctcgatcaaggggcctgaggtcttggac
aagttcatcggagccagcgaacaggcggttcgggccctctttgccagggccacggccgcc
gcgccttgcctcctgtttttcgacgaattcgaagccctggcgccgcggcgtgggagcgac
aacacgggcgtcacggaccgggtggtgaaccagttgctcactttcttggacggggtggag
ggccggacgggtgtctacgtgatgggggcgacttcccgacccgacctggtggactcggcg
ctcttgcgtccgggtcgtttggaccggcaactctacctggggtttcctgacgcgggggaa
agcttgggtattttgaaggctttggtgcggaagatgagcttgacgccccaggctacggcc
gcattggaaaaggtggccttggcggacggggcggacctgatgacgggggcggactggcag
gccatggtcagcacggcgcaattggaggcggtgcatgagaaattagcggctatggggacg
actaagacgggcaatggagcgggtggagagaaggagagcagtcagggcggggatggaggg
gaaggggtggtggtgaccgcacaacatctgtgggcagcttttgcagccacccgcccgtcg
ataccaccgggggaaagggcaaagcttcaggccatttacgacaagtttcggaagtctcgt
gatggggattacaaagactcgaccaacatcgggcccggtaccagcatgagcagcggtggc
gcgcagggccagacgcccatgcagaggctcacgataatgaaggacaacgtgcttaaaaag
gtggagcgccagatggaacagtacccctcgctcacgatgcgttcctcgctgttggacatg
gagaagaaagtgaatgtgccagcccctgcactgttcatccttggcagctcatctctggtc
cttcttttggtccttcttgttagcatggagggcgtcgcgctcctggtcggcttggcctac
ccactcctcggcgccctcaaggccatcaaggtgcaggaggcgcacgtcatcaagttcttc
atccaatacttcctcctcttcaacgccctgaatctgttggagaccttcctgcctctcagc
cgtctccctttgtactacttggggaagctcctctttctggcatgggcgttcaaccccaag
acccagggcgcccggctcgtctacggcaccctccgccccctccttcttccccacctcggc
atcgctttgggtgcatccggggccgagcagtcgaggcctgggggaggaggcaggaagcga
gggggagggagggaaaacacgggggaggggaggttcggggcccgggacgggagcggggaa
ggtgcgagcatccaccttcgcatcgaactcgcagcccggggcttggaaaagccggcggaa
cccgagcggctggacactctgtgccaactccgcatcctgcccatgacaggtgggcacagc
gaggtccggagagcggccctggacgaaggccagtggtacaagagtcggatcaacaccgcg
cctccccaagacgcccccgactggcgacacgacccacaattcctccgcgtcccgaccacg
gaggataacgtcttggaggtgttgattgtgaataagatgagttggagggaccatcccttg
ggccgggtgcgcctgcctctgagggggctctcttttcccatcgagaccacattgcccctt
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integrated database retrieval system