Nannochloropsis gaditana: NGA_2076800
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Entry
NGA_2076800 CDS
T02917
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngd03016
]
NGA_2076800
Enzymes [BR:
ngd01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
NGA_2076800
Transfer RNA biogenesis [BR:
ngd03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
NGA_2076800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-GeneID:
17363146
NCBI-ProteinID:
XP_005856371
UniProt:
K8YQD9
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MASSICTHPISIMPPNHSDIDQAQNRLSPAYLSCVAELVKELMHAFDARVPTNLTRLTAD
LARKRKLKIMPRLMDIIAAVPEEYRDKLLPFIKSKPVRTASGIAVVAVMCKPHRCPHIAM
TGNVCVYCPGGPDSDFEYSTQAYTGYEPTSMRAIRARYHPYAQTRGRVDQLKRLGHSVDK
VEFIVMGGTFMSLSEDYKDWFIRNLHDALSGHSSGSVAEAVAYMEHSESKCIGITIETRP
DFCLKPHLNEMLSYGCTRIEIGVQSIYEDVARDTNRGHTVHAVCNSFQLAKECGFKVVTH
MMPDLPNMGMERDLLGFREFFENPLFRADGLKIYPTLVIRGTGLYELWKTGQYKNYTPDE
LIDLMAKILSLVPPWTRIYRIQRDIPMPLVTAGVENGNLRELALRRMAELDLPCRDVRTR
EVGIRQIHQSARPHEIELVRRDYTANGGWETFLSYEDPHQDILIGLLRLRRPSAVTFRPE
ILNNFSSVVRELHVYGSAVPLHDRDPNKFQHQGYGRLLMEEAERIAKHEHGSAKIVVIAG
VGTRNYYRKLGYELEGPYMSKYLQKGNRPPVEYQAGKMHIDGLEMDERNGLQL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagtatttgtacacaccctatcagcatcatgccgcccaatcattcggatata
gaccaagcacagaatcgcctttcgcccgcttacctcagttgcgttgcagagcttgtcaag
gaattgatgcatgcgtttgacgcccgagttcctacgaatttgacaaggttaacagccgat
ttagcacggaagcggaaactgaaaatcatgcctcgtttgatggacatcattgctgctgtc
cctgaggaatacagggataagttgttgcctttcattaaatcgaagccggttcgtacggcc
tctggtatcgccgtcgtagcagtcatgtgcaagcctcaccgttgtcctcatattgcgatg
actggcaacgtctgtgtatattgtcccggcggacctgactcggattttgaatactccaca
caagcctatactggctatgagcctacaagtatgcgggccattagggcgcgttatcacccg
tatgcccagacgcgtgggcgggtggatcaacttaaacgtttgggtcacagcgttgacaag
gtagaatttatcgtcatgggtggtacattcatgtccttgagcgaggattacaaagactgg
tttatccgcaatcttcatgatgctctctctggtcattcgtcgggcagtgtggccgaagct
gtcgcctacatggagcatagcgaaagtaaatgcattggtattactatcgagactaggcca
gatttttgtcttaaaccacatttgaacgagatgctatcttacggctgtactcgcatcgaa
atcggagttcagagcatttatgaggacgtggctcgagacacaaaccgaggtcacactgtt
cacgccgtgtgtaactcatttcaactggcaaaggagtgcgggttcaaggtcgtgacacac
atgatgccagatctacccaacatgggcatggagagggatcttctaggtttccgcgaattt
tttgagaaccctttgttccgagcagatggcttgaaaatatatcctactcttgttatccga
ggcacaggtttatatgagctttggaaaacaggacaatacaaaaattatactcccgacgaa
ctcatagatttgatggcaaagatcttatctcttgtcccaccttggactcgtatttaccgt
atccaacgggatatcccaatgcctctcgtcactgccggtgttgagaatggtaatcttaga
gagttggcgttgcgccggatggctgaactcgatcttccttgtcgagacgtccggacgcgc
gaagtaggtattcgtcaaattcatcaaagtgctcgcccacatgagattgagcttgttcgt
cgcgactatacggcaaatggcggatgggaaacttttctgagctacgaagatcctcaccaa
gacatccttattgggttgctacgtctccgaaggcctagcgctgttacatttcgtcctgag
atcctgaacaatttctcttccgttgtaagggagctgcatgtctacggctcagccgttccc
ttacacgatagagatccaaataaatttcaacaccaaggttacggcaggcttcttatggag
gaggcagaacgcattgccaaacatgagcatggttctgcgaagatagtagtgatagcagga
gtaggaactagaaattattatcgcaagctcggatatgaactggaagggccttacatgagt
aagtacttgcaaaaaggcaacagaccacccgtagagtatcaagcgggcaaaatgcatatc
gatggattggaaatggatgaaagaaatggcctacaactgtga
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