Nannochloropsis gaditana: NGA_2079700
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Entry
NGA_2079700 CDS
T02917
Name
(RefSeq) ctr9 protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngd03021
]
NGA_2079700
Transcription machinery [BR:
ngd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
NGA_2079700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_12
TPR_2
TPR_8
TPR_11
TPR_1
TPR_6
TPR_9
TPR_19
ANAPC3
NatA_aux_su
TPR_10
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
17361921
NCBI-ProteinID:
XP_005855148
UniProt:
K8YRI5
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
KGAEGRTSLTLDRAFHGRGLAPEAVQEDGHAPHFPTLSIYRKDFRQAMALVDRALARPED
LAPAELRAEAIFVKAQVVHQLDDFESALIYYRDACELCPSLAPAQYGHAQMLAAQSRTLA
LKDRKEEAVARLGEAVAALNRVLDMVPHDPDTLTLLGLLLAEQHQLAADKHEALDKLRRA
VELRPDVKETWVALGQVHQRAPGADPKEALRCLLEAERLILQRQEVVPAPLLSNVGALLH
VKGEQGGAREYYRRALEAYASTGGSGLGELEAQYLPSEQPIQHPRNAVFWRWEDVPGMTV
RLEEGSRAAAVVGSGPEGLTGLQPGDHVRFALGPGPREAFVSVVVDEKAEDDMMGGASGD
LCLKHTFFLATPPDPVPVAVKRSRGLLRHETLTTVFNLAMIHQDMGELAAAEELLLAITK
QYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQ
RLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGL
GLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKH
RLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSES
FKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQ
AEEKRFREDEESRTRQAALVAAEMRRREEVKRAEEEEREREKAAARQAALERDEELRRLT
LQWAQEPREAPRVSKKELARKAGEILSDGEEEGEGAEFAEPEMQGLGPGRQVRLASSSEE
SSNDSSDDEDYGMRGVEPGQGQGGGEEAGGKGVLGPEGKGEGGKGEGGGQ
NT seq
2671 nt
NT seq
+upstream
nt +downstream
nt
gaaaggggcagagggcaggacaagcttgactttggatcgcgccttccacgggcggggcct
ggcccccgaggccgtccaggaggacgggcatgcgccccacttcccgaccttgtcgatcta
ccgcaaggatttcaggcaggccatggccctggtcgaccgcgcgcttgcccgcccggaaga
cctcgcgcctgcggagttacgggctgaggccatctttgtaaaggcgcaagtggttcatca
actcgatgatttcgagtccgcgctgatctactaccgggatgcctgtgagctctgcccttc
tctagcccccgcccagtacggccacgcgcaaatgctggcagcacagagccgcaccctggc
gctgaaagacaggaaggaggaggctgtggcccgcctcggggaggcggtggcggccctgaa
ccgcgtcctcgacatggtgccccacgacccagacacgctcactctgctgggcctgctgct
tgccgagcagcaccagctcgccgccgataagcacgaggccctcgacaagctgcggcgggc
tgtggaattgcgcccggacgtgaaggagacgtgggtggcgcttggtcaggtgcatcaacg
ggcccccggtgccgaccccaaggaggctctccgctgcttgttggaggcggaacggctgat
cctccagcgacaggaggtcgtccctgcccctttgttgagcaacgtgggcgccctcctcca
cgtgaagggagaacaaggcggggcccgcgagtactaccgacgggcgctggaggcctacgc
tagcactgggggctccggtttgggggagctggaggcgcaatatttgccctcggagcagcc
cattcagcacccgaggaacgcggtcttctggcgctgggaagacgtgccgggcatgaccgt
gcggctggaagaaggttcaagggcggcggctgtggtggggagcggccccgagggactgac
gggcctgcagcctggcgaccacgttcgattcgcgctgggaccgggcccgcgggaggcatt
tgtttcggtggtggtagatgagaaggcggaggacgatatgatgggcggggccagcgggga
tctgtgtctgaagcacaccttcttccttgccaccccgcccgacccggtgcccgtggctgt
caagcggagtcgggggctgctgcggcatgagaccctgaccaccgtgttcaacctggccat
gatccaccaggacatgggcgagttggcggcggccgaggagctgcttctggccatcacgaa
gcagtacccctcccacgtgtccgcgcacatcaagttggggatccttgcgcacgggcaagg
tcacacgaaacaggcgggctcctggctcgggcgggcccggcagctggcgcctcaggacaa
ggaggtggcggcggtgtgtggtaaggtcgagcaggacgcgggccatcgcgaccaggccca
acgcttgtttgagccgttgaacaaggagggcgacccctacgccatggtggcgctggggaa
tctgtatttcatgaactcggtcactgtgccagacaaggcacaccacatgggccatgcccg
cgtctaccacaccaaggtgcttaagaaggacgcacggaacctgtacgcggcccacggcct
gggcttggtcctggcggaggagtttggaaaagtggaagacgcgcgcgcagtgctgcaggc
ggtgagggagcgttccggggacaaaccggacgagattttgatcaacattgctcacctgtt
cgtggcacagaaacaacgcaacgcagcgatccattgctacgaatccttcctgaagaagca
ccggttgtcgaccgacgggttgcatgtccgagtcctggaatacgtaagccacgcgcactt
tctggaacgatcttgggagaaagctctccgggcgatcctcaaggccctccacgtggaacc
gggcaagcctgcgcttgctttcaacgtgggtttgatcctggatgcctcggtttcggagtc
cttcaaacgaagcaacgcgcagcggacgacgtctgtcagcgagtcccgatcggccgagcg
agacttgtctgtcgcgatcagcgtcctctcccgcccggaactcgcgcaggcttaccccaa
ggtgaaacggaaggttgattacatgaaggccaatctacaacttgcccgccaatacgtcca
agcggaggagaaacgcttccgtgaggacgaggagtccaggacacggcaggcggccctggt
ggcggcggagatgcggaggcgggaggaggtcaaaagggccgaggaggaggagagggagcg
ggaaaaggcggcggcgcgacaagctgccttggagagggacgaagaactgcgacgtttgac
tctgcagtgggcacaggagccaagggaggcaccccgagtgagcaagaaagagctggcacg
caaggcgggggagattctgtcggatggggaggaggagggggagggggccgagttcgcgga
gccagaaatgcagggtttgggcccgggcagacaggtcaggctggcgagtagtagcgagga
gagtagcaacgacagttccgacgatgaggactatgggatgcggggcgtcgaacccggcca
gggccaaggaggaggtgaggaggcgggcgggaagggggtgcttgggccggaggggaaggg
ggaaggtgggaagggagaggggggcgggcag
DBGET
integrated database retrieval system
