Novosphingobium ginsenosidimutans: FRF71_08905
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Entry
FRF71_08905 CDS
T06189
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngf03021
]
FRF71_08905 (rpoH)
Transcription machinery [BR:
ngf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRF71_08905 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QEA16242
UniProt:
A0A5B8S5D6
LinkDB
All DBs
Position
complement(1784197..1785117)
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AA seq
306 aa
AA seq
DB search
MSDTKRKLPASRGTSVPSLGPEQSLNRYLAEIRKFPVLTAEQEYMLAKRYQEHQDPDAAK
QLVTSHLRLVAKIAMGYRGYGLPVSELIAEGNIGLMQGVKKFEPDRGFRLATYAMWWIKA
SMQEFILRSWSLVKMGTTAAQKKLFFNLRRMKKNLDAYEDSDLHPDDVKAIATKLGVSET
EVVNMNRRMMMGGDASLNVSFNEEGEGQWQDMLQDDRPLQDETVAELEEAGVRHALLTEA
LGSLNERERHILTQRRLIDEPQTLEELSQEYQVSRERVRQIEVRAFEKLQKAMLRIANDR
RLLPAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccaagcgcaagttgcccgccagccgtggcaccagcgtacccagcctgggg
cctgaacagagcctcaaccgctatttggcggaaatccgtaagtttccggtgcttacggcc
gagcaggaatacatgctcgccaagcgctatcaggaacaccaggatcccgatgcggccaag
cagctggttaccagccacctgcgactcgtcgccaagatcgccatgggttaccgcggctat
ggcctgcccgtgtccgagttgattgccgagggcaacatcggcctgatgcagggcgtcaag
aaattcgaacccgatcgcggcttccgcctggcgacctatgccatgtggtggatcaaggct
tcgatgcaggaattcatcctgcgcagctggtcgctcgtgaagatgggcaccaccgccgcg
cagaagaagctgttcttcaacctgcggcggatgaagaagaacctcgatgcatatgaggat
tctgatctccaccctgacgacgtaaaggcgattgcgaccaagctcggcgtatccgagacc
gaggtcgtgaacatgaaccgccggatgatgatgggcggcgatgcctcgctcaacgtctcg
ttcaacgaggaaggcgaaggccagtggcaggacatgctgcaggacgaccgcccgctgcag
gacgagaccgtggccgagctggaagaggccggcgtgcgccatgcgctgctgaccgaagcc
ctgggcagcctgaacgagcgtgagcgccacatcctcacccagcgccgcctgattgacgag
ccgcagacgcttgaagagctgagccaggaataccaggtcagccgcgaacgcgtccgccag
atcgaagtgcgcgctttcgaaaagctgcagaaggccatgctccgcatcgccaacgaccgg
cgcctgttgccggcagcctaa
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