Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH42570
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Entry
RG540_CH42570 CDS
T03244
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngg03016
]
RG540_CH42570
Enzymes [BR:
ngg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RG540_CH42570
Transfer RNA biogenesis [BR:
ngg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RG540_CH42570
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CDN50399
UniProt:
A0A068SX51
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All DBs
Position
complement(4387059..4387682)
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AA seq
207 aa
AA seq
DB search
MAEIRYHEGDIPAVAAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGSADVIRIAAGQ
REAPNLVAMLADPSRQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGLK
DNLKEMLDVDVSKAQQQSDWAAEVLSPAQLEYAASDVLHLHALRDKLTYRLVRDKRAELA
QACFEFLPTRAKLDLLGWEEADIFAHS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcaggtatcatgaaggcgatattccggcagtcgctgcagcccgatatacc
ggggcgatcgccatcgatacggaaacgctcggcctcgtgccgcgtcgtgaccggctttgc
gtcgtacagctttcgccgggcgacggttcggcagacgtgatccgcatcgcggccgggcag
cgcgaggctcccaatctcgtcgccatgctcgccgatccgtcgcgccagaagatcttccat
tacggccgcttcgacatcgccgtgctcttccatacgttcggcgtgaccacgacgccggtg
ttctgcaccaagatcgcctcgcggctgacccgcacctataccgaccggcacgggctcaag
gacaatctcaaggaaatgctcgacgtcgacgtttccaaggcgcagcagcaatccgactgg
gcagccgaggtgctttcgccggcgcaactcgaatatgcggcctccgacgtgctccacctg
catgcgctgcgcgacaagttgacctaccgcctggtgcgcgacaagcgcgccgaactggcc
caggcctgtttcgaattcctgccgacgcgggcgaagctggacctgctgggctgggaagag
gccgatatcttcgcccatagctga
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