Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH00970
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Entry
RG1141_CH00970 CDS
T03208
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RG1141_CH00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH00970
Enzymes [BR:
ngl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RG1141_CH00970
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RG1141_CH00970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CDN52464
UniProt:
A0A068T308
LinkDB
All DBs
Position
96906..97679
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AA seq
257 aa
AA seq
DB search
MKIATFNVNGVNGRLGLLLEWLEEAAPDVVCLQELKAPQEKFPAKAIEKAGYGAAWHGQK
SWNGVAILARGADPIETRRGLPGDPEDLHSRYIEAAVQGVLIACLYAPNGNPAPGPKFAY
KLAWYERFLAHAQALLETGAPIVLAGDYNVMPTDLDVYKPERWRDDALFRPEVREAFSRL
QEQGWTDAIRKLHPGERIYTFWDYFRNAWGRDAGLRLDHLLLSPSIADRLQAAGVDRHIR
GREHASDHAPAWIELGD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgaccttcaatgtgaacggcgtcaacggtcgcctcggcttgctcctcgaa
tggctcgaggaggcggcgccggacgtggtctgtctgcaggagctgaaggcgccgcaggag
aagtttccggcaaaggcgatcgagaaggcgggttacggcgccgcctggcacggccagaaa
agctggaacggcgttgcaatccttgcccgcggtgcggatccgatcgagacccgccgcggc
ctgccgggcgatccggaggaccttcacagccgctatatcgaagccgccgtgcagggcgtg
ctgatcgcctgcctctatgctccgaacggcaatcccgccccggggccgaagttcgcctac
aagcttgcctggtacgagcggtttctggcgcatgctcaggcgctgctggagacgggtgca
cccatcgtccttgccggcgactataacgtcatgccgaccgatctcgatgtctacaaaccg
gaacgctggcgggatgacgcgctgttccggccggaggtacgagaggctttttcccggctg
caggaacaaggctggaccgacgcgatccgcaagctgcacccgggcgagcgcatctatacg
ttctgggattatttcaggaacgcctggggccgagacgccggcctgcggctcgaccacctg
ttgctcagcccctcgatcgcggaccggttgcaggcagccggcgtcgaccgccacattcgc
ggccgcgaacatgcgagcgaccacgcgccggcctggatcgaactcggcgactag
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