Nonomuraea gerenzanensis: LCN96_56000
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Entry
LCN96_56000 CDS
T07782
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCN96_56000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngn03019
]
LCN96_56000
Enzymes [BR:
ngn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LCN96_56000
Messenger RNA biogenesis [BR:
ngn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LCN96_56000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
DUF6757
Motif
Other DBs
NCBI-ProteinID:
UBU13441
LinkDB
All DBs
Position
complement(11986892..11988292)
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AA seq
466 aa
AA seq
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MNDLFRKIAPVADELGRLFADKGHELALVGGPVRDLLLGRIGNDLDLTTDARPERVLEIV
RDWADSVWTIGIDFGTVGLRKGSWLIEVTTYRSESYDPKSRKPEVMYGETLEADLERRDF
AVNAMAVRLPGHEFVDPYGGLDDLRARLLRTPGTPEQSFGDDPLRMLRAARFASQLGFEV
DPQAVAAMTAMAERIEIVSAERIRDELDKLICGANPREGLRLLVDTGLAAHVLPELPKLR
LEIDEHHRHKDVYEHSLTVLDQAIAQEEDGKADRILRWAAIMHDVGKPKTRRHEAGGRVS
FHHHEVVGAQLTKKRMTELKFPKDVVSDVARLVELHLRFHGYGTGEWTDSAVRRYVRDAG
HLLTRLHKLTRADCTTRNKRKAAALSRTYDHLEERISRLAEEEELAKIRPELDGNEIQQV
LGVGPGPIVGQAYKFLLDLRLDKGVLGKEAATAALLEWARSNDLGA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgttccgcaagatcgctccagtggccgacgagctcggccgcctgttcgcc
gacaagggccacgagctggccctcgtcggcggtcccgtgcgcgacctcctgctcggtcgc
atcggcaatgatctcgacctgaccaccgacgcgcgccccgagcgggtgctggagatcgtc
agagactgggccgactccgtatggacgatcggcatcgacttcggcacggtcggcctgcgc
aaggggagctggctgatcgaggtcaccacgtaccggagcgagtcctacgaccccaagtcc
cgcaagcccgaggtcatgtacggcgagacgctcgaggccgacctggagcggcgcgacttc
gcggtcaacgcgatggcggtccgcctgcccggccacgagttcgtggacccgtacggcggc
ctggacgacctgcgggcccgcctgctgcgcaccccgggcacgccggagcagtcgttcggc
gacgacccgctgcgcatgctgcgggcggccaggttcgcctcgcagctcgggttcgaggtg
gacccgcaggccgtggcggcgatgaccgcgatggccgagcgcatcgagatcgtctcggcc
gagcgcatccgcgacgagctcgacaagctgatctgcggcgccaacccgcgcgagggcctg
cgcctgctggtcgacaccgggctggccgcgcacgtgctgcccgagctgccgaagctgcgc
ctggagatcgacgagcaccaccgccacaaggacgtctacgagcactcgctcacggtgctc
gaccaggccatcgcgcaggaggaggacggcaaggccgaccggatcctgcgctgggcggcg
atcatgcacgacgtcggcaagccgaagacgcgccgtcacgaggcgggcgggcgggtctcc
ttccaccaccacgaggtggtcggcgcgcagctcaccaagaagcgcatgaccgagctgaag
ttccccaaggacgtggtgtccgacgtcgcccgcctggtggagctgcacctgcgcttccac
ggctacggcacgggcgagtggaccgacagcgccgtgcgccggtacgtgcgcgacgccggc
cacctgctgacccggctgcacaagctgaccagggccgactgcaccacccgtaacaagcgc
aaggcggcggccctgtcgcgcacctacgaccacctggaggagcgcatctccaggctggcc
gaggaggaggagctggccaagatccgcccggagctcgacggcaacgagatccagcaggtg
ctcggcgtggggccggggccgatcgtggggcaggcctacaagttcctgctcgacctcagg
ctcgacaagggcgtgctcggcaaggaggccgccacggcggcgctgctggagtgggccagg
tcaaacgaccttggtgcctga
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