Naegleria gruberi: NAEGRDRAFT_77230
Help
Entry
NAEGRDRAFT_77230 CDS
T01241
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ngr
Naegleria gruberi
Pathway
ngr00100
Steroid biosynthesis
ngr01100
Metabolic pathways
ngr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
NAEGRDRAFT_77230
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ngr01006
]
NAEGRDRAFT_77230
Enzymes [BR:
ngr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
NAEGRDRAFT_77230
Prenyltransferases [BR:
ngr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NAEGRDRAFT_77230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8852759
NCBI-ProteinID:
XP_002681803
JGI:
Naegr1_77230
UniProt:
D2V2H6
LinkDB
All DBs
AA seq
448 aa
AA seq
DB search
MGLLPFETFSEFGALIQLKYFHKLPAIDRNDVSLKFCYDKLNQVSRSFAMVIQELPDELK
HPVAIFYLVLRGLDTVEDDTEYLKENPEAKHELLRTFYQKIRNPNFHLENCGGSLNATAH
YADLMLHFDHVCKIFLSLDQKYQAVIEDVTMKMGCGMVDYLGMTGVDTVKDYDEYCHYVA
GLVGIGLSDMFTAFGEDKQALFKVGLSGSSEDPLKKSLSNLMGLFLQKVNIIRDYAEDIE
EGRTFYPSSAFQQFGLTQVTDLKDPKNLPQALKTLNYLVTDALSHAPDCLEYMSSIKDPK
VFSFCAIPQVMAIATLVEIYNNPNVFVKNVKIRKGLTARIFMETKTLGDVQKWFSKFAAD
LRVKLEKNLDDPSAQQTKQALDNIQKKAGEKTMKNGLKISSGFGLVSVVSALVYYTLYGR
SPSTVSATRGSSILGRLFGWTGLTPSGI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttcttccttttgaaacctttagcgagtttggagccttgatccaactcaagtat
ttccacaagttaccagccattgatagaaatgatgtatccttgaagttttgttatgacaag
ttgaaccaagtatccagatcctttgccatggtcattcaagaattgccagacgaactcaaa
catccagttgccatcttttatcttgtcttgagaggtttggacactgttgaagacgatact
gaatacttgaaggaaaatcctgaagctaaacatgaattgctcagaaccttctatcaaaag
attcgtaatcctaatttccatttggaaaattgtggtggtagtctcaatgctactgctcac
tatgctgatttaatgttacactttgatcacgtttgtaagattttcctcagccttgaccaa
aagtatcaagctgttattgaagatgtcacaatgaagatgggttgtggtatggttgattat
ttgggaatgactggtgttgatactgtcaaggactatgatgaatattgtcactatgttgct
ggtttggttggtattggtctctcagatatgtttactgcctttggtgaagataaacaagct
ctcttcaaggttggcctcagtggttcatcggaagatccactcaagaaatcactttccaat
ctcatgggtctcttcttacaaaaggttaatattattcgtgactatgctgaagatattgag
gaaggaagaactttctatccatcatctgctttccaacaatttggtctcactcaagttacc
gacttgaaggatccaaagaatttaccacaagctcttaaaacattgaactacctcgtcact
gatgccctctcacatgctccagattgtctcgaatacatgtcaagcattaaggatccaaaa
gttttcagtttctgtgccatcccacaagttatggctattgccactcttgttgaaatttat
aataatccaaacgtttttgtgaagaatgtaaagattagaaagggtctcactgccagaatt
ttcatggaaaccaagactttgggagatgtacaaaagtggttctcaaagtttgctgctgat
ttgagagtcaaactcgaaaagaatttggacgacccatctgcccaacaaactaaacaagct
ttggataatattcaaaagaaggctggagaaaagaccatgaagaatggactcaagatttcc
agcggttttggacttgtttcagtggttagtgctttggtttactatacattatatggacga
tccccatcaactgtttctgccactagaggttcatcaattcttggtagactcttcggttgg
actggtctcactccatcaggcatataa
DBGET
integrated database retrieval system
