Nocardiopsis gilva: CDO52_23290
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Entry
CDO52_23290 CDS
T05022
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00300
Lysine biosynthesis
ngv00470
D-Amino acid metabolism
ngv01100
Metabolic pathways
ngv01110
Biosynthesis of secondary metabolites
ngv01120
Microbial metabolism in diverse environments
ngv01230
Biosynthesis of amino acids
Module
ngv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDO52_23290
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDO52_23290
Enzymes [BR:
ngv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CDO52_23290
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASU85328
UniProt:
A0A223SAZ4
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All DBs
Position
complement(5282730..5283989)
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AA seq
419 aa
AA seq
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MTRYADLAERYGSPLYVYDLDRVAAARRDLFAALPEEFELFYAIKANPHPEVVRTLREGG
DSGGVRACRAEISSTGELAVALAAGFSGEKILYTGPGKTGRELREAIGLGVRMFSVESLG
DMRHIGEAAVELGVEVDALLRVNSASASATTSIRMTGTPSQFGIDSEILPEVLPELRAVP
GTRVAGFHFFPLSNAKNEEALIGEFQNTIALAARLQEELDLPLRFLDIGGGFTLPYAVPG
ERPIYGKLRSELESTLDVHLPGWRDGAPRIACESGRYLVGDSGTLVAGVSNVKESRGRKF
VILDAGINTFGGMSGLGRLLPVAVQLEAEEEPSQKATLVGPLCTPGDILGREVALPPLDS
GDVVSIPNAGAYGPTASLLMFLGRPAPTEVIVRGDEVVSVSRIEHTRSYQVGSGPNVRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgatacgccgacttggccgaacgctacggctcgccgctgtacgtctacgacctc
gaccgggtggccgccgcacggcgggacctgttcgccgcgctgccggaggagttcgagctc
ttctacgcgatcaaggcgaacccgcaccccgaggtggtgcgcaccctccgcgagggcggc
gacagcggcggcgtccgggcctgccgcgcggagatcagctccactggggagctcgccgtg
gccctggccgccgggttcagcggggagaagatcctctacaccggcccgggcaagaccggg
cgcgaactccgcgaggccatcgggctcggcgtccggatgttctcggtggagtccctgggc
gacatgcggcacatcggcgaggccgccgtggagctgggggtcgaggtcgacgccctgcta
cgcgtcaacagcgcctcggccagcgccaccaccagcatccggatgaccggcacgccctcg
cagttcgggatcgacagcgagatcctgcccgaggtgctgcccgagctgcgcgccgtgccc
ggcacgcgcgtcgcgggcttccacttcttcccgctgagcaacgcgaagaacgaggaagcg
ctcatcggggagttccagaacaccatcgcgctggccgcgcgcctgcaggaggagctcgac
ctcccgctgcgcttcctcgacatcggcggcggcttcaccctcccctacgcggtgcccggg
gagcgcccgatctacggcaagctgcgctccgaactggagagcaccctggacgtacacctg
cccggctggcgcgacggcgcgccccggatcgcgtgcgagtccggccgctacctggtgggc
gacagcgggacgctggtcgctggggtcagcaacgtcaaggagagccgcggccggaagttc
gtcatcctcgacgccgggatcaacaccttcggcggcatgtccggcctgggacggctgctc
ccggtcgccgtgcagctggaggctgaggaggagccgtcgcagaaggccaccctcgtcggc
ccgctgtgcacccccggcgacatcctcggccgcgaggtcgccctgccgcccctcgactcc
ggcgacgtggtcagcatccccaacgccggggcctacggccccaccgcgagcctgctcatg
ttcctggggcggcccgcaccgacagaagtgatcgtccggggcgacgaggtcgtctcggtc
tcccgaatcgaacacacccgctcctatcaggtgggatccggccccaacgtgcgccagtag
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