Nitrosococcus halophilus: Nhal_2410
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Entry
Nhal_2410 CDS
T01198
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nhal_2410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhl03021
]
Nhal_2410
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_2410
Enzymes [BR:
nhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nhal_2410
Transcription machinery [BR:
nhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nhal_2410
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nhal_2410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADE15498
UniProt:
D5BVR9
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All DBs
Position
2474620..2475618
Genome browser
AA seq
332 aa
AA seq
DB search
MSVSNFLKPRIVDVQRVNDYTAKVTLEPLERGFGHTLGNALRRILLSSMPGCAIVEAQID
GVLHEYTTKEGVQEDMTEILLNLKGVAIKLHGRDEVTLALNSKGPGAVTAGEIQLEHDVE
IINPEHVIAHLTKSGELNITMKVVRGRGYQPASVRIPKEEEERPIGYLILDASFSPIRRV
TYEVDSARVEQRTDLDKLIIEIETNGTIASDEAVRKAATILQDQLTAFVELEGKTETAKE
KKTAEIDPVLLQPIDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEI
KDVLASRGLSLGMRLENWPPAGLHEEETKASV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatctaattttcttaagcccaggatagtggatgtccaacgcgtcaatgattac
acagctaaagttacgctggaaccgctagaacggggttttgggcatacacttggaaatgcc
ctgcgccgaatcttgttatcttcgatgcctggttgcgctattgtagaagcgcaaattgac
ggcgtattacatgaatataccaccaaggaaggtgtgcaggaagatatgacggaaatcctg
cttaatcttaaaggggtagcaatcaagctacatggccgtgatgaagtgaccctagccttg
aatagtaaagggccaggggcagtaacggcaggggagatacagcttgaacatgatgtggag
attattaatccagaacatgtgattgctcatctcaccaaatccggtgagctcaatattacg
atgaaggtggttcgcggtcgaggttatcaaccagcttccgtacgaatacctaaagaagag
gaagagcgtcctattgggtatctgattctggatgcttcttttagccccatccggcgggtt
acttacgaagtggatagtgcccgggttgagcagcgaactgatctagataagttgattata
gagattgagacaaatggtactatagcttcagacgaggcggtacgcaaagctgcaacaatc
ttacaggatcagctcacggcttttgttgaattggaaggcaaaacagagaccgccaaggag
aaaaagacggctgagatcgatcccgtgctgttgcaaccgatagatgatttggagttgacg
gtgcggtcggcaaactgccttaaggcggaaaatatttattatatcggtgatcttattcag
aggacggaggtggagttgctgaagactcccaatcttggtaagaaatcattgacggaaata
aaagatgtgttggcatcgcggggattgtccttaggtatgcgtttggaaaactggccaccc
gcggggctacatgaggaagaaactaaagcttctgtttga
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