KEGG   Novosphingobium humi: PQ457_03275
Entry
PQ457_03275       CDS       T08806                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
nhum  Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:nhum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nhum03021]
    PQ457_03275 (rpoH)
Transcription machinery [BR:nhum03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PQ457_03275 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DUF5817 HTH_11
Other DBs
NCBI-ProteinID: WCT78011
LinkDB
Position
complement(714502..715407)
AA seq 301 aa
MTQDSNLPAVPALASGEDGLNRYLSQIRKFPVLTAEQEYMLAKRYAEHQDPDAARQLVTS
HLRLVAKIAMGYRGYGLPISELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASMQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKKNIDAFEDTDLHPDDVKKIATDLGVSEAEVVNM
NRRMMMGGDASLNVSFNEEGEGQWQDMLADSGPLQDETVANAEEAQWRHALLAEAMDSLN
ERERAILFERRLTDDPKTLEELSQTYNVSRERVRQIEVRAFEKLQKAMQSIARERMLVAA
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccaagacagcaatctgcccgccgtcccggcgcttgcctccggcgaggacgggctg
aaccgctacctttcgcaaatccgcaagtttcccgtgctgacggcggaacaggaatatatg
ctggccaagcgctatgccgagcatcaggaccccgatgccgcgcgccaattggtcaccagc
catctgcgcctcgtggccaagatcgcgatgggctatcgcggctatggcctgccgatcagc
gagttgatttccgaaggcaacatcgggctgatgcagggcgtcaagaaattcgagccggat
cgcggcttccgtctggccacctatgcgatgtggtggatcaaggccagcatgcaggagttc
atcctgcgcagctggtcgctggtcaagatgggcacgacggcggcgcaaaagaagctgttc
ttcaacctgcgccgtatgaaaaagaacatcgacgcctttgaagacaccgacctgcatccc
gacgatgtaaagaagatcgccaccgacctcggcgtgtccgaggccgaggtggtcaacatg
aaccgccggatgatgatgggcggcgatgcctcgctcaatgtctccttcaacgaggaaggc
gaaggccagtggcaggatatgctggccgattcggggccgttgcaggatgaaaccgtcgcc
aatgccgaagaggcccagtggcgccacgcgctgctggccgaggcgatggacagtctgaac
gagcgcgagcgggcgatcctgttcgaacggcgcctgaccgatgatcccaagacattggaa
gaattgagccagacctataatgtcagccgcgaacgcgtgcgccagatcgaggtgcgcgcc
tttgaaaaactgcaaaaggccatgcagagcatcgcgcgcgaacgcatgctggtcgcggcg
gcctga

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