Niabella ginsenosidivorans: A8C56_01110
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Entry
A8C56_01110 CDS
T04418
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nia02000
]
A8C56_01110
Transporters [BR:
nia02000
]
Other transporters
Pores ion channels [TC:
1
]
A8C56_01110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ANH79755
UniProt:
A0A1A9HXE8
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All DBs
Position
248990..252187
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AA seq
1065 aa
AA seq
DB search
MKQLRFCKTLPKKWVLLVFSLVSCCLIVTAQQRIAVKGRITNASTAAPVSGVSIIEKGTK
NGTLSDSDGNFTLTVAANATLTATYVGYQPREVKVEGRTTLSIGLTEEVKDLGEIVVVGY
GSQRKKDLTGSIANLTQKDLVPIPAANSFDQMMQGKVAGVQITQTSGAPGGNVNVLIRGV
NSITGGNQPLYVVDGYAIGTSGGGNVSSYASGSYSVDGLIGSSGINRINPLSTINPSDIE
SIQILKDASATAIYGSRGANGVVIINTKRGRSGKASINFEHSTGLQEVQKKLDLLTPREY
AEFVAEGRDNAWVFLGGKASDPNNVRGTGQYVKPAFRNPEQFADQGYGTDWQDLIFRKAL
VQNYQLSATGNKNGMMYFVSGGYMDQDGIIIGSDFKKFNTRANLDVNLTSKLKLGVSFAG
TYSYGDFARAEGHLQYRGLISSATASDPTIPVYDENGNYYSEFSDPTGIPVEHVLLINDE
FSDKRKNANVFTNNYLEYKIADGLTFKSSFGVNYSSNQTRLWKSSKIGIATSRTGAAIAG
VTRYNSLNWLNENTLNYKKLVNEKHRFDALLGLSSQKNTDDVVQVGATDFPTDDIPLIAA
GIVSDGTDYTTEWSMVSWFARLNYAFADKYLVTGTLRRDGSSRFGADNKWGTFPSVSVAY
RLSEENFLKQVPAINELKIRASYGLSGNNLIGNYASLGLLGIAPTVSNGQVVSGIVPSSL
ANDLLRWEKSHQTNLGLDLSLFDNRVSLTVDAYRSLKKDLLLSVSLPAASGFSSSVQNIG
KLENKGLEFTLNTDNIVGKNFKWSSDFNISLNRNKVLELNTENSTISTSSYQVAQVGYPI
GSFRLMKILGIFQTAEEIANSPVQNPKVQPGDYRYEDVDGNGTITQADKAIVGNPWPKFT
WGFGNNFSYKNISLGIDLYGSQGNDMYFQGGEVLLNGAGVQNQLAMVADRWRSPEDPGAG
KIARAIRNDYAFGFGASSTKLLFDGSFIRMRNINLAYAFPAALMNRINIQALSVFANVTN
LFTITSYPGYDPEGATSGDNVGMAGVDFFAYPNPRTYSLGLRLTL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattaaggttctgtaaaacgctgccaaagaaatgggtgttgctggtattcagc
ctcgtttcctgttgccttattgtaactgcccagcagcgcattgctgttaaaggcaggata
acgaatgcttccacggctgcgccggtttccggcgtcagtattattgaaaagggtacaaag
aatggcacgttaagcgattcggatggaaattttacattgacggtagccgccaatgcaaca
ctcaccgccacctatgtgggctatcagccccgggaggtgaaggtagagggccgcactacg
ctttctattgggcttacggaagaagtaaaagacctgggtgaaatagtagtagtggggtat
ggatcgcagcgtaaaaaagaccttaccgggtctatagccaatttaacgcaaaaagacctg
gtgcctattcctgcagcaaacagctttgaccagatgatgcagggtaaggtggccggtgtg
cagatcacccagacatccggcgccccgggcggcaatgtaaatgtgctgataaggggcgtt
aactctattacaggaggcaaccagccgctgtacgtggtagatggctatgccattggtacc
agcggaggcggcaatgtaagcagctatgcatccgggtcctattccgtagatgggctgatc
ggttccagcggcatcaaccgcatcaacccgctgagcaccatcaacccttccgatattgaa
tcgatccagatattaaaggatgcttctgcaacggcgatctatggttcaagaggcgccaat
ggtgttgtaattatcaataccaaaagaggaaggagcggaaaggccagtattaattttgag
cattctaccgggctgcaggaggtgcaaaagaaattagacctgcttacgccaagggaatat
gccgagtttgtggctgaaggcagggataacgcctgggtctttttaggcggcaaggcatca
gatcctaataacgtaagaggcacggggcaatatgtaaaaccggcattcagaaaccccgaa
caatttgcggatcagggttatggtaccgactggcaggacctgatcttcagaaaagcactg
gtgcagaattaccagctttctgcaaccggtaataaaaacggcatgatgtattttgtatcc
ggcgggtatatggaccaggatgggatcattatcggttccgattttaagaaattcaatacc
agggccaacctggatgtgaacctgacttctaaattaaagcttggggtatcttttgccgga
acctattcctacggggattttgcacgtgcagaggggcacctgcaataccggggcctgatc
tcttctgccacagcaagcgaccctacgataccggtatatgatgagaatggcaattattat
tcagaattttctgacccaaccggtataccggtagagcatgtattgttaattaatgatgaa
ttttccgataagcggaaaaatgccaacgtgtttaccaataactatcttgaatataaaatt
gcagatggccttacatttaaatcttcctttggcgtaaactattccagcaaccagacacgt
ttatggaaatcttccaagatcggcatcgctaccagcagaaccggtgctgccatagccggg
gtcacccgctataattcgctgaactggttaaatgaaaataccctgaattataaaaagctg
gtaaacgaaaaacatcgctttgatgccctgctgggtctttcttcccagaaaaatacggat
gatgtggtacaggtgggggcaacagattttcctacggatgatattccgttgattgctgca
ggcattgttagcgatggtaccgattacacaacggaatggtcaatggtatcctggttcgcc
cggctgaactatgcattcgctgataaatatctggtaacaggaacgcttcgccgcgatgga
agctcccgttttggcgcggacaataaatggggcaccttcccttctgtttctgtagcgtac
cgcctttccgaagaaaatttcctgaagcaggtaccggccatcaatgaattaaagatccgg
gccagctatggtttgtccggtaacaatcttataggaaactatgcaagccttggtttatta
ggtatagcccccaccgtttcaaacggacaggtggtttccggtattgtgccttcttctctg
gccaacgatcttttgcgctgggaaaaatcgcatcagaccaaccttgggcttgatctcagc
ctgtttgataacagggtttcccttactgttgatgcctaccggagccttaagaaagatctg
ttactctctgtttcgctgcccgctgcctcaggcttctcctcttctgtgcagaatataggg
aagctggaaaacaaaggacttgaatttacgttgaacacggataatattgttggtaaaaat
tttaaatggagctccgattttaatataagccttaaccggaataaggttttagaattaaac
acggaaaattcaacgatcagtacttccagctaccaggtagcacaggtagggtatcccatc
ggcagttttcgcctgatgaagatcctgggcattttccagactgcggaagaaatagctaac
agcccggttcagaatcctaaagtgcagcccggggattaccggtatgaggacgttgacgga
aacggcaccattacccaggccgacaaagcgattgtaggaaatccctggccaaaattcacc
tggggctttgggaacaacttctcttataaaaatatttcccttggcatagacctgtatggt
tcccagggcaatgatatgtatttccaggggggagaggtgctgctgaacggggccggtgtg
caaaatcaactggctatggtggcagacaggtggcgctcaccggaagaccccggtgcgggt
aaaatagcccgggccatccgtaatgattatgcttttggttttggcgccagttctaccaag
cttctttttgacggttcctttataaggatgcgcaatataaatcttgcctatgcgtttccc
gcagcacttatgaaccggatcaacatacaggcattatccgtttttgccaatgtgaccaac
ctgttcaccattaccagctaccccggctatgaccccgaaggcgcaacctccggagacaat
gtaggtatggccggcgttgacttttttgcctatcccaatcctaggacctattctttgggc
ctgaggcttactttataa
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