Niabella ginsenosidivorans: A8C56_21955
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Entry
A8C56_21955 CDS
T04418
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nia03009
]
A8C56_21955
Enzymes [BR:
nia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
A8C56_21955
Ribosome biogenesis [BR:
nia03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A8C56_21955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ANH83289
UniProt:
A0A1A9I891
LinkDB
All DBs
Position
complement(5205386..5206300)
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AA seq
304 aa
AA seq
DB search
MKKVDPRFEKFAHKKSNAAIKEAFKQEKRQYKKERAAYFEQKKAAARIAAEAPKIERRAA
TQTAQMPLNKYLAHSGLCSRRDAAELVKEGKVKVNAVVVWDPGYKVQPNDVVTANGKKVT
PEKNLVYILLNKPKDYITTTDDPQKRKTVLDLIKNATKERVYPVGRLDRNTSGVLLITND
GELAQQLTHPSNEIKKVYAVTLNKPLEKKDFDKIVQGVVLEDGPAPVDVLAYADSKDKTQ
VGIEIHSGRNRIVRRIFESLGYEVKHLDRVMFGGLTKKNIERGKYRFLKEKEIRNLKFFG
KGKK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttgatccccgttttgaaaagtttgcgcataaaaaaagcaatgcagcaata
aaggaagcctttaaacaggaaaagcgccaatacaaaaaggaacgcgctgcatattttgag
caaaaaaaagcagcagcgagaattgctgccgaagccccaaagatagagcgcagggcagca
acccagacagctcagatgccgttgaacaaatacctggcgcacagcggtctctgttccaga
agagatgccgcggaactggttaaagaaggaaaagtaaaagtaaatgcggttgtggtgtgg
gacccgggctataaggtgcagcccaatgatgtagttacggcaaatggtaaaaaagtaacc
ccggaaaagaacctggtctatatcttactcaataaacccaaagactatattactaccacc
gatgatcctcaaaaacggaagactgtactggatctcataaaaaatgctacaaaagaaaga
gtttaccctgtcggccggctggaccgcaatacctccggcgttttattgatcacaaacgac
ggagaactggcacagcaattaacacaccccagcaatgaaataaaaaaagtgtatgcagtt
acattaaataagccgcttgaaaaaaaagactttgataaaatagtacagggtgttgtgctg
gaagacgggccggccccggttgatgtactggcttacgctgattcaaaagataagacacaa
gtcggcattgagatccatagtggccgcaaccgcattgtccggcgcatctttgaatctctt
gggtatgaagtaaagcacctggatcgtgttatgttcggagggcttaccaaaaagaatatt
gaaaggggaaagtatcgttttcttaaggaaaaagaaatccgcaatcttaagttttttgga
aagggaaaaaaataa
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