Nibribacter ruber: GU926_13160
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Entry
GU926_13160 CDS
T06388
Name
(GenBank) peptidase S13
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
nib
Nibribacter ruber
Pathway
nib00550
Peptidoglycan biosynthesis
nib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GU926_13160
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nib01002
]
GU926_13160
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nib01011
]
GU926_13160
Enzymes [BR:
nib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GU926_13160
Peptidases and inhibitors [BR:
nib01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GU926_13160
Peptidoglycan biosynthesis and degradation proteins [BR:
nib01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GU926_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QHL88330
UniProt:
A0A6P1NZ68
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All DBs
Position
3120420..3121820
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AA seq
466 aa
AA seq
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MTMSILSQKSFHKLLPVVALWTIMGCSSSKPTPAVTDTATVEPAPAVPAPPPYGPAEIKR
QVLASEALKNRFVGFALYDPELKQMVVEHNADKYFVPASNTKLFTFYASLKMLGDSIPAL
KYVVRGDSLIFWGTGDPTFTHMDLKNTLAYDFLKNRKEKLYYLEAPFESTPFGQNWGWDD
YNYYYQPERSVFPIHGNIVKFVKKTGGSSYSVTPKRFKALVKTDTTRNASKDPFVRAWRS
NDLQYFPKHAAASYSVEVPFIPSADMTVKLLADTLKRSVTLLKKRALPQDGQIFYGLPAD
TVIKRMLQVSDNLFAEQLMALCSGTLSDTLSVERAIKHVTKTYLADLPDAPVWVDGSGLS
SQNMFTPRSIIALLQKLQQERPEERLLPLLATGGQPGTFRAIYQAPVPYVFGKSGTLSHV
HNQSGYIKTKSGKLLLFSFMNNNYSTSSAEIRNEMVRIMTEVHERY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtctatactctcccaaaaatcatttcataagctgttgccggttgttgccctc
tggacgattatgggctgttccagcagcaaacccactcccgccgtcaccgacaccgcaacg
gtagaacccgcgccagccgtgccggcaccaccgccgtacgggcccgccgaaatcaagcgc
caggtgctggcctctgaagcactcaagaaccggtttgtaggcttcgcgctgtatgatcca
gaactcaagcagatggtggtggagcacaacgcagacaaatatttcgtgccggcctccaac
accaagctgttcaccttttacgccagcctcaagatgctgggagactccattccggcgctt
aagtacgtggtgcgcggcgactcattgatcttttggggaaccggcgatcctaccttcacg
cacatggacctgaagaacaccctggcctatgacttcctgaagaaccgcaaagaaaagctg
tattacctggaggcgccttttgagagcacgcccttcgggcaaaactggggctgggatgac
tacaactactactatcaacccgaacgcagcgtctttcccattcatggcaacatcgtcaag
tttgtaaaaaagaccggcggatcttcctactcagtgacgcccaagcggttcaaagccttg
gtgaagacagacaccacccgcaatgccagcaaagacccttttgtaagagcctggcgaagc
aatgaccttcagtatttccccaagcacgccgccgcttcttattctgtggaagtgccgttc
attccgtcggcagacatgaccgtcaagctcttggcagacaccttgaagcgatcagtgact
ttgctgaaaaaacgagcccttccccaagacggacaaatcttctatgggctgccggcagac
acggtgatcaagcgcatgctgcaggtaagcgacaacctctttgccgagcagctcatggcg
ctttgctctggtacgctctcagacacgctctctgtggagcgcgccatcaagcacgtcacc
aaaacctacctggcagacttgccagatgcccccgtctgggtagacggctctggcttgtcc
tcgcagaacatgttcacgccgcgcagcatcattgcccttctgcagaaactgcagcaggag
cgccctgaggaacgcttgttgccgcttctggccacgggcgggcagccgggcacctttcgg
gccatttaccaggcgccggtgccctatgtcttcgggaagtctggtacgctgtcccatgtg
cacaaccagagcggctacatcaagaccaagagcggcaaacttttactgttcagttttatg
aacaacaactacagcacgtcttctgctgagatcaggaatgagatggtccggattatgacg
gaagtgcacgagcggtattaa
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