Nitrosomonas sp. Is79A3: Nit79A3_0591
Help
Entry
Nit79A3_0591 CDS
T01569
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nii
Nitrosomonas sp. Is79A3
Brite
KEGG Orthology (KO) [BR:
nii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nii03016
]
Nit79A3_0591
Enzymes [BR:
nii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Nit79A3_0591
Transfer RNA biogenesis [BR:
nii03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Nit79A3_0591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF1825
Motif
Other DBs
NCBI-ProteinID:
AEJ00470
UniProt:
F8GJ46
LinkDB
All DBs
Position
complement(629421..629963)
Genome browser
AA seq
180 aa
AA seq
DB search
MTNKDTNTEFIRVFFAIFPNKLVQKQLAHQTEILESTYGGRKVRTQNLHLTLLFLGDIST
HHIEALQQAMKNISAKKFELSLDKIGYWKHNQIIYIQAKQFSTELLFLVDSLKIALSEAG
FPFDKRSYRPHVTLIRKATHATEINLNTPIKWHVNKWSLIQSKQTEHGVNYIPLKQWNLK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgactaataaagacaccaatacagaatttattcgcgtattttttgccatttttcctaat
aaattagtacaaaagcaattggcgcatcaaaccgaaatactggaatctacttacggtggg
cgcaaagttcgaacacagaatttgcatcttacgttgttattccttggagatatcagcacg
caccatattgaagcgctgcagcaagccatgaaaaatatatcagcaaaaaaatttgagctt
agtttagacaaaattggctactggaagcacaatcaaattatttatatccaggcaaagcaa
ttttctaccgaactgctctttctcgttgattctctgaagattgcgctgtcagaagctgga
ttcccatttgacaaacgcagttatagacctcatgttacgctaatccggaaagcaacccat
gcaacagaaatcaatttaaatacccccatcaaatggcatgtcaataaatggtctctcatc
caatccaaacaaactgagcacggtgttaattatattccactgaaacagtggaacttgaaa
taa
DBGET
integrated database retrieval system
