Nitrincola iocasae: F5I99_05965
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Entry
F5I99_05965 CDS
T06212
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
nik
Nitrincola iocasae
Pathway
nik00260
Glycine, serine and threonine metabolism
nik00400
Phenylalanine, tyrosine and tryptophan biosynthesis
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01230
Biosynthesis of amino acids
Module
nik_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F5I99_05965 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
F5I99_05965 (trpB)
Enzymes [BR:
nik01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
F5I99_05965 (trpB)
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
QEW06078
UniProt:
A0A5J6LCP4
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Position
complement(1312941..1314143)
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AA seq
400 aa
AA seq
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MSKIEYAAMPDAEGYFGEYGGQIIPPELQRVMNDIDKAYEEIRRMPEFQNELKVLFADYI
GRPSPVFHARRLSEKLGGAQIFLKREDLNHTGAHKINHCLGEALLAKYMGKTKVIAETGA
GQHGVALATACALVGIPCEIHMGQVDIEKEHPNVVKMKILGCTLIPVTRGTATLKDAVDS
AFEEYLKDPDNFIYAIGSVVGPHPFPKMVRDFQSIIGEEAREQFMTRFGKLPDYLTACVG
GGCNSIGLFTAFLDDESVKMVGVEPAGEGLDTDKHSATLTLGKPGQIHGMKCYVLETEDG
QPMPVHSIASGLDYPGVGPQHSYLKDLGRVQYETATDQECLDAFLTLSRVEGIIPALESS
HAVAWAIRTAPTLKPEQTILVNISGRGDKDADYVADLLGL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatcgaatacgcagccatgcctgatgccgagggctactttggtgaatatggt
ggccagatcatccctcctgaactgcagcgcgtaatgaacgacattgacaaggcgtatgaa
gagattcgccggatgcctgagttccaaaacgaattgaaagtgctgtttgccgactatatt
ggtcgcccaagcccggtatttcatgcgcgccgtttgagcgaaaagctgggaggtgcgcaa
atcttcctgaagcgcgaagacctgaaccataccggtgcccacaaaatcaaccactgcctg
ggagaggccctgctggctaaatacatgggcaaaaccaaggtgattgctgaaactggcgcg
ggccagcatggcgtcgcactggccacggcctgtgccctggtaggtattccctgtgaaatt
cacatgggccaggtggatatcgaaaaagaacaccccaatgtggtcaaaatgaaaattctc
ggctgcacattgattccggtaacccgcggcacggcaaccttgaaagatgcagtcgacagt
gcatttgaagaatacctgaaagatccagataacttcatttacgccatcggctctgtcgtc
ggcccgcacccttttccgaaaatggtccgggatttccagtccatcatcggtgaagaagcc
cgcgaacagtttatgacccgttttggtaaattacctgactatctgaccgcttgcgtcggt
ggtggctgtaattcgattggcttgtttaccgccttcctggatgatgagtcggtaaaaatg
gttggcgttgagccagcgggggaaggtctggataccgacaaacactcagcgactctcacc
ttgggtaaacccggacagattcatggcatgaaatgctatgtactggaaactgaagatggc
caacctatgccggttcactccattgcatcgggtctggattatcccggtgttggacctcag
cactcttatctgaaggatctgggtcgggttcagtatgaaaccgcaactgatcaggaatgc
ctggatgcgtttctgacactgtcacgggtcgagggcatcatcccggcgctggaaagctct
catgcagtcgcctgggctatccgcacagcgccgacactcaaacccgaacaaacgatcctg
gtaaacatttccggtcggggtgataaggatgctgactacgttgccgacctactgggtttg
tga
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